Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.66■□□□□ 0.58
SSX4O60224 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.66■□□□□ 0.58
SSX4O60224 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.66■□□□□ 0.58
SSX4O60224 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.66■□□□□ 0.58
SSX4O60224 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.66■□□□□ 0.58
SSX4O60224 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SSX4O60224 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SSX4O60224 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.65■□□□□ 0.58
SSX4O60224 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX4O60224 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SSX4O60224 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX4O60224 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX4O60224 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SSX4O60224 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SSX4O60224 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX4O60224 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX4O60224 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SSX4O60224 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.65■□□□□ 0.58
SSX4O60224 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.65■□□□□ 0.58
SSX4O60224 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX4O60224 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX4O60224 TERF1P2-201ENST00000583350 1212 ntBASIC18.65■□□□□ 0.58
SSX4O60224 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SSX4O60224 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSX4O60224 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.65■□□□□ 0.58
SSX4O60224 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX4O60224 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX4O60224 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSX4O60224 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.65■□□□□ 0.58
SSX4O60224 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSX4O60224 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SSX4O60224 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSX4O60224 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX4O60224 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX4O60224 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSX4O60224 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.64■□□□□ 0.57
SSX4O60224 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.64■□□□□ 0.57
SSX4O60224 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSX4O60224 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
SSX4O60224 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.64■□□□□ 0.57
SSX4O60224 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.64■□□□□ 0.57
SSX4O60224 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.64■□□□□ 0.57
SSX4O60224 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SSX4O60224 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSX4O60224 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSX4O60224 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX4O60224 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.63■□□□□ 0.57
SSX4O60224 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX4O60224 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SSX4O60224 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.63■□□□□ 0.57
SSX4O60224 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SSX4O60224 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SSX4O60224 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SSX4O60224 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SSX4O60224 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSX4O60224 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX4O60224 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSX4O60224 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.63■□□□□ 0.57
SSX4O60224 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX4O60224 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX4O60224 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX4O60224 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX4O60224 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.63■□□□□ 0.57
SSX4O60224 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.63■□□□□ 0.57
SSX4O60224 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.63■□□□□ 0.57
SSX4O60224 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSX4O60224 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
SSX4O60224 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX4O60224 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SSX4O60224 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX4O60224 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX4O60224 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX4O60224 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SSX4O60224 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX4O60224 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX4O60224 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX4O60224 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.62■□□□□ 0.57
SSX4O60224 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX4O60224 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX4O60224 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX4O60224 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.62■□□□□ 0.57
SSX4O60224 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX4O60224 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX4O60224 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.62■□□□□ 0.57
SSX4O60224 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSX4O60224 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX4O60224 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SSX4O60224 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms