Protein–RNA interactions for Protein: O00505

KPNA3, Importin subunit alpha-4, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3O00505 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KPNA3O00505 LSM12P1-201ENST00000411836 588 ntBASIC20.83■□□□□ 0.93
KPNA3O00505 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.83■□□□□ 0.93
KPNA3O00505 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.83■□□□□ 0.93
KPNA3O00505 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.83■□□□□ 0.93
KPNA3O00505 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KPNA3O00505 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KPNA3O00505 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
KPNA3O00505 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KPNA3O00505 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.83■□□□□ 0.92
KPNA3O00505 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.83■□□□□ 0.92
KPNA3O00505 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
KPNA3O00505 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KPNA3O00505 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
KPNA3O00505 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.82■□□□□ 0.92
KPNA3O00505 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KPNA3O00505 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
KPNA3O00505 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.82■□□□□ 0.92
KPNA3O00505 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.82■□□□□ 0.92
KPNA3O00505 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.82■□□□□ 0.92
KPNA3O00505 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
KPNA3O00505 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
KPNA3O00505 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.82■□□□□ 0.92
KPNA3O00505 AC116050.2-201ENST00000612102 1779 ntBASIC20.82■□□□□ 0.92
KPNA3O00505 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KPNA3O00505 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KPNA3O00505 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KPNA3O00505 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.81■□□□□ 0.92
KPNA3O00505 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KPNA3O00505 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.81■□□□□ 0.92
KPNA3O00505 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
KPNA3O00505 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KPNA3O00505 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.81■□□□□ 0.92
KPNA3O00505 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.81■□□□□ 0.92
KPNA3O00505 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.81■□□□□ 0.92
KPNA3O00505 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.81■□□□□ 0.92
KPNA3O00505 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.81■□□□□ 0.92
KPNA3O00505 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KPNA3O00505 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KPNA3O00505 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KPNA3O00505 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.81■□□□□ 0.92
KPNA3O00505 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KPNA3O00505 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KPNA3O00505 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
KPNA3O00505 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.8■□□□□ 0.92
KPNA3O00505 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
KPNA3O00505 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KPNA3O00505 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KPNA3O00505 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.8■□□□□ 0.92
KPNA3O00505 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.8■□□□□ 0.92
KPNA3O00505 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KPNA3O00505 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.8■□□□□ 0.92
KPNA3O00505 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.8■□□□□ 0.92
KPNA3O00505 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KPNA3O00505 AC100791.3-201ENST00000617619 330 ntBASIC20.8■□□□□ 0.92
KPNA3O00505 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KPNA3O00505 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KPNA3O00505 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KPNA3O00505 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KPNA3O00505 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
KPNA3O00505 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.79■□□□□ 0.92
KPNA3O00505 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KPNA3O00505 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
KPNA3O00505 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
KPNA3O00505 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.79■□□□□ 0.92
KPNA3O00505 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.79■□□□□ 0.92
KPNA3O00505 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
KPNA3O00505 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KPNA3O00505 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
KPNA3O00505 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KPNA3O00505 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KPNA3O00505 MCRIP2P1-201ENST00000394346 511 ntBASIC20.79■□□□□ 0.92
KPNA3O00505 DUSP5P2-201ENST00000426873 1033 ntBASIC20.79■□□□□ 0.92
KPNA3O00505 AC097658.1-201ENST00000475555 843 ntBASIC20.79■□□□□ 0.92
KPNA3O00505 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.79■□□□□ 0.92
KPNA3O00505 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.79■□□□□ 0.92
KPNA3O00505 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.79■□□□□ 0.92
KPNA3O00505 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
KPNA3O00505 CYP2T3P-201ENST00000601990 817 ntBASIC20.79■□□□□ 0.92
KPNA3O00505 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KPNA3O00505 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KPNA3O00505 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.79■□□□□ 0.92
KPNA3O00505 Z98882.1-201ENST00000622160 2253 ntBASIC20.79■□□□□ 0.92
KPNA3O00505 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KPNA3O00505 KRT17P1-201ENST00000399211 1546 ntBASIC20.78■□□□□ 0.92
KPNA3O00505 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KPNA3O00505 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KPNA3O00505 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
KPNA3O00505 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KPNA3O00505 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KPNA3O00505 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KPNA3O00505 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KPNA3O00505 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KPNA3O00505 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.78■□□□□ 0.92
KPNA3O00505 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.78■□□□□ 0.92
KPNA3O00505 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.78■□□□□ 0.92
KPNA3O00505 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.78■□□□□ 0.92
KPNA3O00505 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.78■□□□□ 0.92
KPNA3O00505 RNA5SP413-201ENST00000516373 109 ntBASIC20.78■□□□□ 0.92
KPNA3O00505 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms