Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.88■□□□□ 0.93
AP3B1O00203 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3B1O00203 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3B1O00203 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3B1O00203 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
AP3B1O00203 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3B1O00203 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3B1O00203 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.87■□□□□ 0.93
AP3B1O00203 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3B1O00203 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP3B1O00203 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.87■□□□□ 0.93
AP3B1O00203 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.87■□□□□ 0.93
AP3B1O00203 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3B1O00203 SLC7A5P1-201ENST00000568957 537 ntBASIC20.87■□□□□ 0.93
AP3B1O00203 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3B1O00203 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
AP3B1O00203 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.87■□□□□ 0.93
AP3B1O00203 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
AP3B1O00203 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.87■□□□□ 0.93
AP3B1O00203 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3B1O00203 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3B1O00203 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
AP3B1O00203 AP005212.1-201ENST00000581547 1997 ntBASIC20.86■□□□□ 0.93
AP3B1O00203 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3B1O00203 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.86■□□□□ 0.93
AP3B1O00203 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3B1O00203 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3B1O00203 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3B1O00203 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3B1O00203 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.86■□□□□ 0.93
AP3B1O00203 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3B1O00203 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3B1O00203 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
AP3B1O00203 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.86■□□□□ 0.93
AP3B1O00203 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.86■□□□□ 0.93
AP3B1O00203 KRT18P14-201ENST00000534205 1250 ntBASIC20.86■□□□□ 0.93
AP3B1O00203 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3B1O00203 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.86■□□□□ 0.93
AP3B1O00203 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AP3B1O00203 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.86■□□□□ 0.93
AP3B1O00203 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.86■□□□□ 0.93
AP3B1O00203 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3B1O00203 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3B1O00203 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3B1O00203 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
AP3B1O00203 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.85■□□□□ 0.93
AP3B1O00203 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.85■□□□□ 0.93
AP3B1O00203 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3B1O00203 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
AP3B1O00203 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.85■□□□□ 0.93
AP3B1O00203 AC116050.2-201ENST00000612102 1779 ntBASIC20.85■□□□□ 0.93
AP3B1O00203 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP3B1O00203 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.84■□□□□ 0.93
AP3B1O00203 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP3B1O00203 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3B1O00203 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
AP3B1O00203 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
AP3B1O00203 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.84■□□□□ 0.93
AP3B1O00203 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3B1O00203 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
AP3B1O00203 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3B1O00203 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.84■□□□□ 0.93
AP3B1O00203 AC243732.1-201ENST00000612648 864 ntBASIC20.84■□□□□ 0.93
AP3B1O00203 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.84■□□□□ 0.93
AP3B1O00203 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AP3B1O00203 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP3B1O00203 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.83■□□□□ 0.93
AP3B1O00203 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.83■□□□□ 0.93
AP3B1O00203 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
AP3B1O00203 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
AP3B1O00203 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
AP3B1O00203 KRT19P1-201ENST00000405746 1186 ntBASIC20.83■□□□□ 0.93
AP3B1O00203 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.83■□□□□ 0.93
AP3B1O00203 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
AP3B1O00203 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.83■□□□□ 0.92
AP3B1O00203 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3B1O00203 AL157384.1-201ENST00000445995 2473 ntBASIC20.83■□□□□ 0.92
AP3B1O00203 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3B1O00203 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
AP3B1O00203 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3B1O00203 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3B1O00203 LINC01006-201ENST00000333319 2292 ntBASIC20.83■□□□□ 0.92
AP3B1O00203 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3B1O00203 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
AP3B1O00203 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3B1O00203 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP3B1O00203 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3B1O00203 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.82■□□□□ 0.92
AP3B1O00203 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
AP3B1O00203 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3B1O00203 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
AP3B1O00203 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3B1O00203 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3B1O00203 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.82■□□□□ 0.92
AP3B1O00203 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.82■□□□□ 0.92
AP3B1O00203 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.82■□□□□ 0.92
AP3B1O00203 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3B1O00203 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
AP3B1O00203 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.82■□□□□ 0.92
AP3B1O00203 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms