Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC073508.3-201ENST00000619697 1419 ntBASIC19.97■□□□□ 0.79
CNOT1A5YKK6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.97■□□□□ 0.79
CNOT1A5YKK6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 AC026471.5-201ENST00000615068 467 ntBASIC19.97■□□□□ 0.79
CNOT1A5YKK6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 AC137767.1-201ENST00000602918 1920 ntBASIC19.96■□□□□ 0.79
CNOT1A5YKK6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.96■□□□□ 0.79
CNOT1A5YKK6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.95■□□□□ 0.78
CNOT1A5YKK6 ANOS2P-203ENST00000472227 1816 ntBASIC19.95■□□□□ 0.78
CNOT1A5YKK6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 KRT126P-201ENST00000549467 1181 ntBASIC19.94■□□□□ 0.78
CNOT1A5YKK6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 AC020928.2-201ENST00000588717 2197 ntBASIC19.94■□□□□ 0.78
CNOT1A5YKK6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 AC007322.3-201ENST00000426526 701 ntBASIC19.94■□□□□ 0.78
CNOT1A5YKK6 TPM4P1-201ENST00000436100 807 ntBASIC19.94■□□□□ 0.78
CNOT1A5YKK6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 AL121894.2-201ENST00000602977 491 ntBASIC19.94■□□□□ 0.78
CNOT1A5YKK6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT1A5YKK6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT1A5YKK6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT1A5YKK6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT1A5YKK6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.93■□□□□ 0.78
CNOT1A5YKK6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.93■□□□□ 0.78
CNOT1A5YKK6 AC105020.6-201ENST00000621523 1217 ntBASIC19.93■□□□□ 0.78
CNOT1A5YKK6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT1A5YKK6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT1A5YKK6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.93■□□□□ 0.78
CNOT1A5YKK6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.93■□□□□ 0.78
CNOT1A5YKK6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.93■□□□□ 0.78
CNOT1A5YKK6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.93■□□□□ 0.78
CNOT1A5YKK6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT1A5YKK6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CNOT1A5YKK6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms