Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 AC011484.1-201ENST00000377652 1995 ntBASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 RBM17P2-201ENST00000616397 1405 ntBASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 MYCNOS-205ENST00000641950 531 ntBASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC162PA2VCL2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
CCDC162PA2VCL2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CCDC162PA2VCL2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC162PA2VCL2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCDC162PA2VCL2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC162PA2VCL2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 AL162430.1-201ENST00000480705 870 ntBASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC162PA2VCL2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 MIR5787-201ENST00000611784 55 ntBASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC162PA2VCL2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC162PA2VCL2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms