Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 MIR663A-201ENST00000385250 93 ntBASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 AL512625.2-201ENST00000417533 625 ntBASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 CYP2T1P-201ENST00000432607 1285 ntBASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 CROCCP5-201ENST00000436658 830 ntBASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 RARRES2P4-201ENST00000514074 484 ntBASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 AL121832.2-201ENST00000610979 668 ntBASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 AC100791.3-201ENST00000617619 330 ntBASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV25A0A0B4J276 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 AL049796.1-201ENST00000565336 1766 ntBASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV25A0A0B4J276 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 AF201337.1-201ENST00000520239 748 ntBASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV25A0A0B4J276 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV25A0A0B4J276 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRAV25A0A0B4J276 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRAV25A0A0B4J276 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV25A0A0B4J276 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV25A0A0B4J276 GPX1P1-201ENST00000388829 606 ntBASIC15.52■□□□□ 0.08
TRAV25A0A0B4J276 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRAV25A0A0B4J276 NCF1B-203ENST00000435988 1254 ntBASIC15.52■□□□□ 0.08
TRAV25A0A0B4J276 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms