Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV12-3A0A0B4J271 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 IRS3P-201ENST00000223076 1006 ntBASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 AC006128.1-201ENST00000624704 1661 ntBASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 PLK5-205ENST00000642079 1969 ntBASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV12-3A0A0B4J271 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 AC105265.2-201ENST00000467189 838 ntBASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 AC079140.4-201ENST00000507448 529 ntBASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 TPRG1LP1-201ENST00000598702 760 ntBASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 AC053503.5-201ENST00000601508 636 ntBASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 AC121338.2-201ENST00000622535 1744 ntBASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-3A0A0B4J271 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV12-3A0A0B4J271 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV12-3A0A0B4J271 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV12-3A0A0B4J271 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV12-3A0A0B4J271 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TRAV12-3A0A0B4J271 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
TRAV12-3A0A0B4J271 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
TRAV12-3A0A0B4J271 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV12-3A0A0B4J271 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-3A0A0B4J271 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 EEF1DP3-203ENST00000566025 782 ntBASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 LINC01006-201ENST00000333319 2292 ntBASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 AC061975.6-201ENST00000579045 1553 ntBASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV12-3A0A0B4J271 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV12-3A0A0B4J271 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms