Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TBC1D3EA0A087X179 ECEL1P1-201ENST00000373592 1742 ntBASIC20.64■□□□□ 0.9
TBC1D3EA0A087X179 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.64■□□□□ 0.9
TBC1D3EA0A087X179 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TBC1D3EA0A087X179 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.64■□□□□ 0.9
TBC1D3EA0A087X179 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.64■□□□□ 0.9
TBC1D3EA0A087X179 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 AC008687.6-201ENST00000596318 630 ntBASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D3EA0A087X179 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D3EA0A087X179 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TBC1D3EA0A087X179 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.62■□□□□ 0.89
TBC1D3EA0A087X179 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TBC1D3EA0A087X179 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TBC1D3EA0A087X179 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.62■□□□□ 0.89
TBC1D3EA0A087X179 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.62■□□□□ 0.89
TBC1D3EA0A087X179 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3EA0A087X179 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3EA0A087X179 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3EA0A087X179 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D3EA0A087X179 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.61■□□□□ 0.89
TBC1D3EA0A087X179 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 PRORSD1P-201ENST00000295112 541 ntBASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 UNC93B5-201ENST00000530315 699 ntBASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 AC006058.3-201ENST00000606217 1069 ntBASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D3EA0A087X179 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.59■□□□□ 0.89
TBC1D3EA0A087X179 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms