Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 C12orf77-203ENST00000623395 1516 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 IL4R-202ENST00000395762 3685 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AC090260.1-201ENST00000566715 1931 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 LTA4H-201ENST00000228740 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 OR10G7-201ENST00000330487 936 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 ACTG1P1-201ENST00000415794 1129 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 LINC02087-201ENST00000418821 951 ntTSL 2 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AL663058.1-201ENST00000453379 353 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AL445673.1-201ENST00000455124 416 ntTSL 3 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AL109809.2-201ENST00000455216 493 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AL683842.1-201ENST00000455505 525 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 RN7SL337P-201ENST00000462468 301 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 LINC00881-202ENST00000471719 791 ntTSL 2 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 RN7SL580P-201ENST00000492489 287 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 ZNF195-220ENST00000528796 881 ntTSL 5 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AC073612.1-201ENST00000548802 771 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AC005632.1-201ENST00000550637 576 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 PCED1B-AS1-211ENST00000552990 654 ntTSL 3 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 PSMA3-AS1-211ENST00000556225 839 ntTSL 4 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AC015688.1-201ENST00000584894 199 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AC020907.4-201ENST00000605640 526 ntTSL 3 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 FGF11-203ENST00000575082 2315 ntTSL 2 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 NREP-203ENST00000395634 1468 ntTSL 2 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AC025277.1-201ENST00000564852 1655 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AL022100.1-201ENST00000636624 1678 ntTSL 5 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 PLAC8-203ENST00000426923 2253 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AC005618.2-201ENST00000618012 2297 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 TNFSF14-201ENST00000245912 4336 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 PRRX1-201ENST00000239461 4284 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 FRMPD1-203ENST00000539465 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 XRCC6-205ENST00000405878 2200 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 Z95114.2-201ENST00000623490 2205 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 TTLL3-221ENST00000455274 2848 ntTSL 2 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 WDR37-202ENST00000358220 4582 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 HSPH1-209ENST00000630972 3570 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 DDX19B-201ENST00000288071 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 TRPC2-201ENST00000451043 3173 ntBASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 ITIH5-202ENST00000397146 6721 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 PGAP2-225ENST00000493547 1772 ntTSL 3 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 NCEH1-204ENST00000475381 4687 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 SLC25A53-202ENST00000594199 6225 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 NSRP1-201ENST00000247026 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 BTN2A3P-203ENST00000465856 2483 ntTSL 2 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 LINC02204-201ENST00000630447 3206 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 DNASE1L3-206ENST00000483681 2099 ntTSL 5 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 CUL4A-201ENST00000326335 3705 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 NBPF6-201ENST00000370040 2222 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AL109615.3-201ENST00000422059 2232 ntTSL 2 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 NBPF4-202ENST00000613157 2222 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 STAU1-201ENST00000340954 3334 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 VPS18-201ENST00000220509 3895 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 TIMELESS-203ENST00000553532 5121 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 CLDN1-201ENST00000295522 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ATOX1-201ENST00000313115 488 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 KRTAP11-1-201ENST00000332378 912 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 RN7SKP217-201ENST00000364640 340 ntBASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 HIST1H2BI-201ENST00000377733 381 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 IGLV5-45-201ENST00000390296 397 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 RNA5SP203-201ENST00000410451 136 ntBASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 SCAF4-203ENST00000434667 3846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AC016723.1-202ENST00000436982 643 ntTSL 5 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AL592103.1-201ENST00000446321 810 ntTSL 2 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AC002463.1-201ENST00000453459 1188 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 RN7SL144P-201ENST00000475761 295 ntBASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AC016968.1-201ENST00000479610 697 ntTSL 3 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AC064862.6-201ENST00000511350 459 ntBASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 RNA5SP409-201ENST00000516815 109 ntBASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AC103681.1-201ENST00000531663 423 ntTSL 3 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 TMED10P1-201ENST00000534816 655 ntBASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AL160314.2-201ENST00000554857 662 ntTSL 4 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AL121809.1-201ENST00000556389 849 ntTSL 2 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 RN7SL783P-201ENST00000577950 301 ntBASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ARMCX7P-202ENST00000602449 655 ntBASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AC012491.1-201ENST00000605674 799 ntBASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 LINC00581-201ENST00000630914 990 ntTSL 3 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ARSF-202ENST00000381127 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 CCDC173-203ENST00000447353 2181 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ITM2A-201ENST00000373298 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 HNRNPA1-203ENST00000546500 4121 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 LINC01346-201ENST00000412674 3242 ntTSL 2 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 STEAP4-203ENST00000414498 2332 ntTSL 2 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 AC068282.1-201ENST00000433673 2690 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 KIF2A-201ENST00000381103 3360 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ZSCAN9-202ENST00000425468 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 GALNTL5-211ENST00000616416 1763 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
SYCE2Q6PIF2 ACAD10-203ENST00000455480 4071 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms