Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL450405.1-201ENST00000443998 474 ntBASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC007160.1-201ENST00000488095 319 ntBASIC8.91□□□□□ -0.98
SNX18Q96RF0 LINC01322-203ENST00000496693 1075 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC026780.1-202ENST00000513812 572 ntTSL 2 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 SMUG1-222ENST00000514685 926 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 LINC01605-202ENST00000519738 733 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC138646.1-201ENST00000519983 633 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC245187.1-201ENST00000520162 559 ntTSL 4 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC008456.1-201ENST00000523598 731 ntTSL 3 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AP003064.1-201ENST00000526045 590 ntTSL 4 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AP003721.4-201ENST00000544421 810 ntTSL 2 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 ACYP1-203ENST00000553302 606 ntTSL 2 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 TGIF2LY-202ENST00000559055 927 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC027763.1-201ENST00000572223 720 ntBASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC093330.1-205ENST00000580580 737 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC064805.1-201ENST00000581412 529 ntTSL 4 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC093330.1-204ENST00000582763 396 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC006115.3-201ENST00000594400 560 ntTSL 4 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AL161911.2-201ENST00000603920 371 ntBASIC8.91□□□□□ -0.98
SNX18Q96RF0 AP000435.2-201ENST00000610280 940 ntBASIC8.91□□□□□ -0.98
SNX18Q96RF0 MIR1273H-201ENST00000612921 116 ntBASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC006547.1-201ENST00000628442 550 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 AC005906.2-209ENST00000639919 1244 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 SGK1-201ENST00000237305 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 KITLG-201ENST00000228280 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SNX18Q96RF0 ERG-204ENST00000398907 4809 ntTSL 5 BASIC8.91□□□□□ -0.98
SNX18Q96RF0 ARSF-202ENST00000381127 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 CELF2-202ENST00000399850 7085 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 ACTR3C-206ENST00000613959 5142 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 AC008663.2-202ENST00000519897 1418 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 HMGB3-201ENST00000325307 3560 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 SUCLA2P3-201ENST00000458157 1357 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 PART1-201ENST00000504876 5616 ntTSL 2 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 ST8SIA6-AS1-201ENST00000377597 1811 ntTSL 2 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 SLAMF1-201ENST00000235739 883 ntTSL 5 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 RN7SKP231-201ENST00000363281 277 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 SNORA68B-201ENST00000364518 133 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 TRBV11-1-201ENST00000390367 364 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 U3.21-201ENST00000391019 220 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 CEACAM21-202ENST00000401445 1008 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 AL391416.1-201ENST00000403475 994 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 AC078845.1-201ENST00000445293 889 ntTSL 5 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 Z93930.1-201ENST00000447099 245 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 TDRG1-204ENST00000451810 919 ntTSL 2 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 AL390778.1-201ENST00000452377 527 ntTSL 3 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 FTLP15-201ENST00000455449 532 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 RPSAP38-201ENST00000475442 881 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 BAALC-AS1-202ENST00000500902 993 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 TIMM10-203ENST00000525587 486 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 PRR5L-209ENST00000527487 740 ntTSL 3 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 CDCA3-208ENST00000540683 985 ntTSL 2 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 AC079313.1-201ENST00000552785 546 ntTSL 4 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 AC027237.2-201ENST00000558702 391 ntTSL 3 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 LINC01169-201ENST00000558797 833 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 ABHD17AP8-201ENST00000569698 574 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 AC012146.3-201ENST00000574352 490 ntTSL 3 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 ZNF738-203ENST00000594245 1086 ntTSL 2 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 AC005176.1-202ENST00000597791 384 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 Metazoa_SRP.92-201ENST00000613789 329 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 AL158077.1-201ENST00000616744 174 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 ZNF195-229ENST00000618467 440 ntTSL 5 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 PDE4DIP-249ENST00000620605 823 ntTSL 2 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 AL031719.2-201ENST00000624488 476 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 SPRY4-IT1-201ENST00000630558 703 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 TCEANC2-203ENST00000391366 1783 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 AP000265.1-201ENST00000565959 1782 ntBASIC8.9□□□□□ -0.98
SNX18Q96RF0 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
SNX18Q96RF0 PAN2-209ENST00000548043 4641 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 TFDP3-201ENST00000310125 1680 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
SNX18Q96RF0 AC083836.1-201ENST00000519366 2125 ntTSL 5 BASIC8.9□□□□□ -0.99
SNX18Q96RF0 LANCL1-201ENST00000233714 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
SNX18Q96RF0 TBC1D7-221ENST00000607658 1649 ntTSL 3 BASIC8.9□□□□□ -0.99
SNX18Q96RF0 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.99
SNX18Q96RF0 CREBRF-205ENST00000522692 2466 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
SNX18Q96RF0 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC8.9□□□□□ -0.99
SNX18Q96RF0 BUD13P1-201ENST00000603676 1489 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 SYT14-202ENST00000367019 2997 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 AC074043.1-201ENST00000483126 1776 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 KRBOX4-201ENST00000298190 1354 ntAPPRIS P3 TSL 2 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 AC237221.2-201ENST00000624231 2537 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms