Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AP002383.6-201ENST00000616726 697 ntBASIC10.21□□□□□ -0.77
SLC1A1P43005 AL138828.1-206ENST00000625353 811 ntTSL 5 BASIC10.21□□□□□ -0.77
SLC1A1P43005 SLTM-226ENST00000628684 1040 ntTSL 5 BASIC10.21□□□□□ -0.77
SLC1A1P43005 AL158175.1-202ENST00000635173 1194 ntTSL 5 BASIC10.21□□□□□ -0.77
SLC1A1P43005 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SLC1A1P43005 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SLC1A1P43005 ZNF506-203ENST00000540806 1424 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.78
SLC1A1P43005 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SLC1A1P43005 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
SLC1A1P43005 TXLNGY-203ENST00000445715 1915 ntBASIC10.21□□□□□ -0.78
SLC1A1P43005 TRIM55-201ENST00000276573 1960 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SLC1A1P43005 AC239799.2-201ENST00000622359 2002 ntBASIC10.21□□□□□ -0.78
SLC1A1P43005 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC10.21□□□□□ -0.78
SLC1A1P43005 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SLC1A1P43005 LINC01806-202ENST00000439050 2333 ntTSL 2 BASIC10.21□□□□□ -0.78
SLC1A1P43005 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 ATL1-202ENST00000441560 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC10.2□□□□□ -0.78
SLC1A1P43005 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 TRAF1-203ENST00000546084 3715 ntTSL 2 BASIC10.2□□□□□ -0.78
SLC1A1P43005 FMN1-203ENST00000558197 4060 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 DNASE1-201ENST00000246949 4200 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 ADH1A-201ENST00000209668 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 NEUROD6-201ENST00000297142 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 LEO1-202ENST00000315141 1981 ntTSL 2 BASIC10.2□□□□□ -0.78
SLC1A1P43005 AC005037.1-202ENST00000332935 820 ntTSL 3 BASIC10.2□□□□□ -0.78
SLC1A1P43005 GABPA-201ENST00000354828 5120 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 RAET1E-201ENST00000357183 958 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 SPACA7-202ENST00000375699 807 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
SLC1A1P43005 CXorf21-201ENST00000378962 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 TRDV2-201ENST00000390469 520 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SLC1A1P43005 AP000692.1-201ENST00000397184 596 ntTSL 5 BASIC10.2□□□□□ -0.78
SLC1A1P43005 Z93930.2-205ENST00000422972 409 ntTSL 2 BASIC10.2□□□□□ -0.78
SLC1A1P43005 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 CC2D2A-203ENST00000438599 1673 ntTSL 5 BASIC10.2□□□□□ -0.78
SLC1A1P43005 IFNWP19-201ENST00000438727 566 ntBASIC10.2□□□□□ -0.78
SLC1A1P43005 AC245060.1-201ENST00000440829 358 ntBASIC10.2□□□□□ -0.78
SLC1A1P43005 MIR3681HG-207ENST00000451644 623 ntTSL 3 BASIC10.2□□□□□ -0.78
SLC1A1P43005 BX842568.2-201ENST00000453595 1230 ntBASIC10.2□□□□□ -0.78
SLC1A1P43005 ACTN4P2-201ENST00000473049 1892 ntBASIC10.2□□□□□ -0.78
SLC1A1P43005 RNU2-24P-201ENST00000516830 143 ntBASIC10.2□□□□□ -0.78
SLC1A1P43005 AP001830.2-201ENST00000529278 494 ntTSL 2 BASIC10.2□□□□□ -0.78
SLC1A1P43005 RASGRP1-206ENST00000558164 1757 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 ARL2BP-202ENST00000562023 547 ntTSL 3 BASIC10.2□□□□□ -0.78
SLC1A1P43005 ARHGAP23P1-202ENST00000567025 423 ntTSL 5 BASIC10.2□□□□□ -0.78
SLC1A1P43005 AC009075.2-201ENST00000568483 301 ntBASIC10.2□□□□□ -0.78
SLC1A1P43005 AL137798.1-201ENST00000607700 339 ntBASIC10.2□□□□□ -0.78
SLC1A1P43005 ZNF155-209ENST00000611002 2732 ntAPPRIS P3 TSL 4 BASIC10.2□□□□□ -0.78
SLC1A1P43005 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
SLC1A1P43005 HIST1H4D-201ENST00000614247 312 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SLC1A1P43005 AC084824.3-201ENST00000620472 856 ntBASIC10.2□□□□□ -0.78
SLC1A1P43005 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC10.2□□□□□ -0.78
SLC1A1P43005 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC10.2□□□□□ -0.78
SLC1A1P43005 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC10.2□□□□□ -0.78
SLC1A1P43005 ARMC4-201ENST00000305242 3572 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SLC1A1P43005 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SLC1A1P43005 FBXL2-222ENST00000538892 2793 ntTSL 5 BASIC10.2□□□□□ -0.78
SLC1A1P43005 AP002358.2-201ENST00000532980 2148 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 CTCFL-222ENST00000609232 3668 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 GDF9-206ENST00000624492 1823 ntTSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 STK32A-203ENST00000398523 1637 ntTSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 C14orf159-211ENST00000518868 3075 ntAPPRIS ALT1 TSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 PAK6-201ENST00000260404 3865 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 WFDC10B-201ENST00000330523 630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 ZNF483-204ENST00000374374 800 ntTSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 MIR941-2-201ENST00000401322 72 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 MIR941-4-201ENST00000401376 72 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 ANKRD30BL-202ENST00000409867 1251 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SLC1A1P43005 AC092474.1-201ENST00000416158 1167 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 BX664727.2-201ENST00000420308 228 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 RPLP1P13-201ENST00000434567 299 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 AL731533.1-201ENST00000439575 608 ntTSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 AL133353.1-201ENST00000452391 303 ntTSL 5 BASIC10.19□□□□□ -0.78
SLC1A1P43005 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC10.19□□□□□ -0.78
SLC1A1P43005 AL139220.2-215ENST00000453688 654 ntTSL 5 BASIC10.19□□□□□ -0.78
SLC1A1P43005 DTNBP1-204ENST00000462989 1010 ntTSL 3 BASIC10.19□□□□□ -0.78
SLC1A1P43005 AL132671.2-201ENST00000467125 930 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 GCNT1P2-201ENST00000504682 595 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 RNA5SP411-201ENST00000516136 114 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 RN7SL819P-201ENST00000581896 270 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 AC083798.2-203ENST00000608346 564 ntTSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC10.19□□□□□ -0.78
SLC1A1P43005 CR848007.3-201ENST00000615762 228 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 NDUFA6-AS1-216ENST00000621190 766 ntTSL 5 BASIC10.19□□□□□ -0.78
SLC1A1P43005 AL513478.1-201ENST00000621265 228 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 MIR941-5-201ENST00000621667 72 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 AL139093.1-201ENST00000622029 1014 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 AC091953.1-201ENST00000624775 296 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 Z84468.1-202ENST00000630584 667 ntTSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 MIR941-3-201ENST00000637366 72 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 MFSD8-259ENST00000642042 2303 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 EXD2-202ENST00000409014 3404 ntTSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 CMSS1-201ENST00000421999 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 AP002490.1-201ENST00000502284 4233 ntTSL 2 BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 380.6 ms