Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 AC138907.5-202ENST00000569484 235 ntBASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 AC008175.2-201ENST00000612840 297 ntBASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 FEM1AP4-201ENST00000443167 1987 ntBASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 POU5F1P4-201ENST00000413175 1085 ntBASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 MIR6821-201ENST00000617625 74 ntBASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DRB4X5D2U9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 AC010141.2-201ENST00000452426 721 ntBASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HLA-DRB4X5D2U9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 AC005229.4-201ENST00000610085 2198 ntBASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 AC034268.1-201ENST00000441047 882 ntBASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 DUX4L2-201ENST00000561772 1275 ntBASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 AC104187.1-201ENST00000607510 612 ntBASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 DUX4L6-201ENST00000626483 1275 ntBASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 DUX4L1-201ENST00000627662 1275 ntBASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 DUX4L8-201ENST00000629013 1275 ntBASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 DUX4L3-201ENST00000630187 1275 ntBASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 DUX4L7-201ENST00000630678 1275 ntBASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 DUX4L5-201ENST00000630834 1275 ntBASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRB4X5D2U9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 AP004607.4-201ENST00000530158 1459 ntBASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms