Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 AC012618.2-201ENST00000428058 849 ntBASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SCN10AQ9Y5Y9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 MIR4497-201ENST00000583208 89 ntBASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.93■■□□□ 1.26
SCN10AQ9Y5Y9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SCN10AQ9Y5Y9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SCN10AQ9Y5Y9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SCN10AQ9Y5Y9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.91■■□□□ 1.26
SCN10AQ9Y5Y9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.91■■□□□ 1.26
SCN10AQ9Y5Y9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.91■■□□□ 1.26
SCN10AQ9Y5Y9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SCN10AQ9Y5Y9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.91■■□□□ 1.26
SCN10AQ9Y5Y9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
SCN10AQ9Y5Y9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.91■■□□□ 1.26
SCN10AQ9Y5Y9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
SCN10AQ9Y5Y9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SCN10AQ9Y5Y9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.89■■□□□ 1.26
SCN10AQ9Y5Y9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
SCN10AQ9Y5Y9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SCN10AQ9Y5Y9 MIR718-201ENST00000390190 70 ntBASIC22.89■■□□□ 1.26
SCN10AQ9Y5Y9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SCN10AQ9Y5Y9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SCN10AQ9Y5Y9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.89■■□□□ 1.26
SCN10AQ9Y5Y9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.89■■□□□ 1.26
SCN10AQ9Y5Y9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SCN10AQ9Y5Y9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
SCN10AQ9Y5Y9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SCN10AQ9Y5Y9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms