Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CDC42BPBQ9Y5S2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CDC42BPBQ9Y5S2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC31.69■■■□□ 2.66
CDC42BPBQ9Y5S2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CDC42BPBQ9Y5S2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 MTDHP1-201ENST00000605323 784 ntBASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDC42BPBQ9Y5S2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CDC42BPBQ9Y5S2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CDC42BPBQ9Y5S2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
CDC42BPBQ9Y5S2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC31.67■■■□□ 2.66
CDC42BPBQ9Y5S2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC31.67■■■□□ 2.66
CDC42BPBQ9Y5S2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CDC42BPBQ9Y5S2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 BX088651.1-201ENST00000540551 451 ntBASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 LINC01023-201ENST00000606054 436 ntBASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 AC133681.1-201ENST00000465482 601 ntBASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 AC233702.5-201ENST00000584107 538 ntBASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC31.66■■■□□ 2.66
CDC42BPBQ9Y5S2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
CDC42BPBQ9Y5S2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC31.64■■■□□ 2.66
CDC42BPBQ9Y5S2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPBQ9Y5S2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
CDC42BPBQ9Y5S2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
CDC42BPBQ9Y5S2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPBQ9Y5S2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPBQ9Y5S2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CDC42BPBQ9Y5S2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 TSPY7P-201ENST00000431358 1114 ntBASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 RPS2P55-201ENST00000397318 883 ntBASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 AC107956.1-201ENST00000494359 873 ntBASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 AC116050.2-201ENST00000612102 1779 ntBASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC31.63■■■□□ 2.65
CDC42BPBQ9Y5S2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDC42BPBQ9Y5S2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDC42BPBQ9Y5S2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC31.62■■■□□ 2.65
CDC42BPBQ9Y5S2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC31.62■■■□□ 2.65
CDC42BPBQ9Y5S2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDC42BPBQ9Y5S2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDC42BPBQ9Y5S2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDC42BPBQ9Y5S2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDC42BPBQ9Y5S2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDC42BPBQ9Y5S2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 AL355075.4-201ENST00000554988 638 ntBASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPBQ9Y5S2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC31.61■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms