Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RAI2Q9Y5P3 AC005229.4-201ENST00000610085 2198 ntBASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RAI2Q9Y5P3 CLDN5-201ENST00000403084 2357 ntBASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 AC013268.1-206ENST00000638368 961 ntBASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 AC112229.1-201ENST00000639295 961 ntBASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAI2Q9Y5P3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
RAI2Q9Y5P3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAI2Q9Y5P3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAI2Q9Y5P3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAI2Q9Y5P3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAI2Q9Y5P3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.95■□□□□ 0.94
RAI2Q9Y5P3 CNN2P6-201ENST00000439038 900 ntBASIC20.95■□□□□ 0.94
RAI2Q9Y5P3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.95■□□□□ 0.94
RAI2Q9Y5P3 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.95■□□□□ 0.94
RAI2Q9Y5P3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAI2Q9Y5P3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RAI2Q9Y5P3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 AC091799.1-201ENST00000422823 811 ntBASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 AL137060.1-201ENST00000618151 2648 ntBASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.94■□□□□ 0.94
RAI2Q9Y5P3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 AC007322.4-201ENST00000509611 723 ntBASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 AC231657.2-201ENST00000624556 255 ntBASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAI2Q9Y5P3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 AC007322.1-201ENST00000426983 750 ntBASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RAI2Q9Y5P3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms