Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 KRT18P14-201ENST00000534205 1250 ntBASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA11Q9Y5H2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 AC010141.2-201ENST00000452426 721 ntBASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 AC120498.10-201ENST00000621827 505 ntBASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA11Q9Y5H2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA11Q9Y5H2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 KRT16P2-201ENST00000414673 1423 ntBASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 DUX4L2-201ENST00000561772 1275 ntBASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 AC104187.1-201ENST00000607510 612 ntBASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 DUX4L6-201ENST00000626483 1275 ntBASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 DUX4L1-201ENST00000627662 1275 ntBASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 DUX4L8-201ENST00000629013 1275 ntBASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 DUX4L3-201ENST00000630187 1275 ntBASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 DUX4L7-201ENST00000630678 1275 ntBASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 DUX4L5-201ENST00000630834 1275 ntBASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGA11Q9Y5H2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA11Q9Y5H2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA11Q9Y5H2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.02■□□□□ 0.79
PCDHGA11Q9Y5H2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms