Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 PLK5-205ENST00000642079 1969 ntBASIC16.57■□□□□ 0.24
LSM4Q9Y4Z0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 TERF1P2-201ENST00000583350 1212 ntBASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSM4Q9Y4Z0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 ID1-201ENST00000376105 1233 ntBASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 KRT18P14-201ENST00000534205 1250 ntBASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSM4Q9Y4Z0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 LINC02228-203ENST00000641970 1355 ntBASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 AC010525.1-201ENST00000585559 441 ntBASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 AP006587.3-201ENST00000525742 1516 ntBASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSM4Q9Y4Z0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSM4Q9Y4Z0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms