Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 AC034268.1-201ENST00000441047 882 ntBASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 RARRES2P11-201ENST00000635158 484 ntBASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS9D1Q9Y2B5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 MIR6821-201ENST00000617625 74 ntBASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS9D1Q9Y2B5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 SLC7A5P2-201ENST00000553010 536 ntBASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
VPS9D1Q9Y2B5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 AC243732.1-201ENST00000612648 864 ntBASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS9D1Q9Y2B5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.53■□□□□ 0.88
VPS9D1Q9Y2B5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS9D1Q9Y2B5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
VPS9D1Q9Y2B5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.52■□□□□ 0.88
VPS9D1Q9Y2B5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS9D1Q9Y2B5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.52■□□□□ 0.88
VPS9D1Q9Y2B5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.52■□□□□ 0.88
VPS9D1Q9Y2B5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
VPS9D1Q9Y2B5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
VPS9D1Q9Y2B5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS9D1Q9Y2B5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS9D1Q9Y2B5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
VPS9D1Q9Y2B5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms