Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP2BQ9UQN3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP2BQ9UQN3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP2BQ9UQN3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CHMP2BQ9UQN3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 AC007225.1-201ENST00000566331 1836 ntBASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 AF213884.3-201ENST00000563833 479 ntBASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP2BQ9UQN3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 EDA-201ENST00000338901 1233 ntBASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 PCDHAC2-203ENST00000615316 3011 ntBASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.06■□□□□ 0.96
CHMP2BQ9UQN3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.05■□□□□ 0.96
CHMP2BQ9UQN3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP2BQ9UQN3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
CHMP2BQ9UQN3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.04■□□□□ 0.96
CHMP2BQ9UQN3 MIR939-201ENST00000401314 82 ntBASIC21.04■□□□□ 0.96
CHMP2BQ9UQN3 RASA4CP-201ENST00000424092 1398 ntBASIC21.04■□□□□ 0.96
CHMP2BQ9UQN3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CHMP2BQ9UQN3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP2BQ9UQN3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHMP2BQ9UQN3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP2BQ9UQN3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 AC110285.6-201ENST00000617652 491 ntBASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 AL355001.2-201ENST00000620617 1191 ntBASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 FP700111.2-201ENST00000619190 1892 ntBASIC21.03■□□□□ 0.96
CHMP2BQ9UQN3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 AC061975.6-201ENST00000579045 1553 ntBASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 EEF1DP3-203ENST00000566025 782 ntBASIC21.02■□□□□ 0.96
CHMP2BQ9UQN3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms