Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.13■□□□□ 0.97
EBF1Q9UH73 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EBF1Q9UH73 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.13■□□□□ 0.97
EBF1Q9UH73 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EBF1Q9UH73 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EBF1Q9UH73 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EBF1Q9UH73 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EBF1Q9UH73 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
EBF1Q9UH73 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EBF1Q9UH73 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EBF1Q9UH73 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EBF1Q9UH73 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
EBF1Q9UH73 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EBF1Q9UH73 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EBF1Q9UH73 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
EBF1Q9UH73 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
EBF1Q9UH73 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
EBF1Q9UH73 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EBF1Q9UH73 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EBF1Q9UH73 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.12■□□□□ 0.97
EBF1Q9UH73 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
EBF1Q9UH73 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.12■□□□□ 0.97
EBF1Q9UH73 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.12■□□□□ 0.97
EBF1Q9UH73 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EBF1Q9UH73 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.12■□□□□ 0.97
EBF1Q9UH73 AP003097.1-201ENST00000530657 1135 ntBASIC21.12■□□□□ 0.97
EBF1Q9UH73 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EBF1Q9UH73 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EBF1Q9UH73 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EBF1Q9UH73 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EBF1Q9UH73 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.12■□□□□ 0.97
EBF1Q9UH73 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.12■□□□□ 0.97
EBF1Q9UH73 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.12■□□□□ 0.97
EBF1Q9UH73 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 GUSBP5-202ENST00000510805 1989 ntBASIC21.11■□□□□ 0.97
EBF1Q9UH73 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
EBF1Q9UH73 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.11■□□□□ 0.97
EBF1Q9UH73 AL596275.1-201ENST00000423464 877 ntBASIC21.11■□□□□ 0.97
EBF1Q9UH73 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.11■□□□□ 0.97
EBF1Q9UH73 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
EBF1Q9UH73 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.11■□□□□ 0.97
EBF1Q9UH73 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.11■□□□□ 0.97
EBF1Q9UH73 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.11■□□□□ 0.97
EBF1Q9UH73 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EBF1Q9UH73 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
EBF1Q9UH73 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
EBF1Q9UH73 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
EBF1Q9UH73 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
EBF1Q9UH73 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EBF1Q9UH73 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EBF1Q9UH73 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.1■□□□□ 0.97
EBF1Q9UH73 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.1■□□□□ 0.97
EBF1Q9UH73 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
EBF1Q9UH73 AC073648.6-201ENST00000641589 218 ntBASIC21.1■□□□□ 0.97
EBF1Q9UH73 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.1■□□□□ 0.97
EBF1Q9UH73 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EBF1Q9UH73 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EBF1Q9UH73 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EBF1Q9UH73 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.1■□□□□ 0.97
EBF1Q9UH73 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EBF1Q9UH73 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EBF1Q9UH73 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EBF1Q9UH73 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
EBF1Q9UH73 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.09■□□□□ 0.97
EBF1Q9UH73 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EBF1Q9UH73 AC100791.3-201ENST00000617619 330 ntBASIC21.09■□□□□ 0.97
EBF1Q9UH73 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EBF1Q9UH73 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
EBF1Q9UH73 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.09■□□□□ 0.97
EBF1Q9UH73 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EBF1Q9UH73 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EBF1Q9UH73 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EBF1Q9UH73 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EBF1Q9UH73 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
EBF1Q9UH73 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
EBF1Q9UH73 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.08■□□□□ 0.97
EBF1Q9UH73 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
EBF1Q9UH73 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.08■□□□□ 0.97
EBF1Q9UH73 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
EBF1Q9UH73 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.08■□□□□ 0.97
EBF1Q9UH73 UNC93B4-201ENST00000505679 747 ntBASIC21.08■□□□□ 0.97
EBF1Q9UH73 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.08■□□□□ 0.97
EBF1Q9UH73 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EBF1Q9UH73 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.08■□□□□ 0.97
EBF1Q9UH73 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
EBF1Q9UH73 FAM21FP-204ENST00000608637 956 ntBASIC21.08■□□□□ 0.97
EBF1Q9UH73 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EBF1Q9UH73 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms