Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 VN1R53P-201ENST00000429536 957 ntBASIC23.49■■□□□ 1.35
RNF216Q9NWF9 NCF1B-203ENST00000435988 1254 ntBASIC23.49■■□□□ 1.35
RNF216Q9NWF9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 AC231657.2-201ENST00000624556 255 ntBASIC23.49■■□□□ 1.35
RNF216Q9NWF9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF216Q9NWF9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 AC104771.1-201ENST00000603335 964 ntBASIC23.48■■□□□ 1.35
RNF216Q9NWF9 AC112220.4-201ENST00000604982 1263 ntBASIC23.48■■□□□ 1.35
RNF216Q9NWF9 AL109923.1-201ENST00000618799 583 ntBASIC23.48■■□□□ 1.35
RNF216Q9NWF9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RNF216Q9NWF9 C11orf96-202ENST00000528572 1834 ntBASIC23.47■■□□□ 1.35
RNF216Q9NWF9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 MTND2P3-201ENST00000452458 470 ntBASIC23.47■■□□□ 1.35
RNF216Q9NWF9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 AC104187.1-201ENST00000607510 612 ntBASIC23.47■■□□□ 1.35
RNF216Q9NWF9 AL022328.3-201ENST00000607943 679 ntBASIC23.47■■□□□ 1.35
RNF216Q9NWF9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 AL355578.1-201ENST00000607405 1328 ntBASIC23.47■■□□□ 1.35
RNF216Q9NWF9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF216Q9NWF9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 CROCCP5-201ENST00000436658 830 ntBASIC23.46■■□□□ 1.35
RNF216Q9NWF9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 AC110792.4-201ENST00000609843 298 ntBASIC23.46■■□□□ 1.35
RNF216Q9NWF9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.46■■□□□ 1.35
RNF216Q9NWF9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
RNF216Q9NWF9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RNF216Q9NWF9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 GPX1P1-201ENST00000388829 606 ntBASIC23.45■■□□□ 1.34
RNF216Q9NWF9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms