Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 SNORA78-201ENST00000459373 127 ntBASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 AC073912.3-201ENST00000624414 853 ntBASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RC3H2Q9HBD1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.27■■□□□ 1.16
RC3H2Q9HBD1 FAM99A-202ENST00000538190 1989 ntBASIC22.27■■□□□ 1.15
RC3H2Q9HBD1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.15
RC3H2Q9HBD1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.26■■□□□ 1.15
RC3H2Q9HBD1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.25■■□□□ 1.15
RC3H2Q9HBD1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RC3H2Q9HBD1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RC3H2Q9HBD1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RC3H2Q9HBD1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RC3H2Q9HBD1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H2Q9HBD1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.22■■□□□ 1.15
RC3H2Q9HBD1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H2Q9HBD1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H2Q9HBD1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H2Q9HBD1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RC3H2Q9HBD1 ECEL1P3-201ENST00000427961 737 ntBASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms