Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A1Q9H2H9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A1Q9H2H9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC38A1Q9H2H9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A1Q9H2H9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC38A1Q9H2H9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
SLC38A1Q9H2H9 AC073314.1-201ENST00000568729 2216 ntBASIC19.19■□□□□ 0.66
SLC38A1Q9H2H9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 DUX4L2-201ENST00000561772 1275 ntBASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 DUX4L6-201ENST00000626483 1275 ntBASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 DUX4L1-201ENST00000627662 1275 ntBASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 DUX4L8-201ENST00000629013 1275 ntBASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 DUX4L3-201ENST00000630187 1275 ntBASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 DUX4L7-201ENST00000630678 1275 ntBASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 DUX4L5-201ENST00000630834 1275 ntBASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 AP005212.1-201ENST00000581547 1997 ntBASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 AC007225.1-201ENST00000566331 1836 ntBASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A1Q9H2H9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 KRT18P14-201ENST00000534205 1250 ntBASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 AP001160.3-201ENST00000601484 763 ntBASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 AC092667.1-201ENST00000434301 2586 ntBASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A1Q9H2H9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 GABARAPL3-202ENST00000624044 1851 ntBASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A1Q9H2H9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 SLC7A5P2-201ENST00000553010 536 ntBASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC38A1Q9H2H9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms