Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC68Q9H2F9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 AC138907.5-202ENST00000569484 235 ntBASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC68Q9H2F9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC68Q9H2F9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 TERF1P2-201ENST00000583350 1212 ntBASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC68Q9H2F9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 KRT18P14-201ENST00000534205 1250 ntBASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 CCDC92B-201ENST00000575506 885 ntBASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC68Q9H2F9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 DUX4L2-201ENST00000561772 1275 ntBASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 DUX4L6-201ENST00000626483 1275 ntBASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 DUX4L1-201ENST00000627662 1275 ntBASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 DUX4L8-201ENST00000629013 1275 ntBASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 DUX4L3-201ENST00000630187 1275 ntBASIC20.65■□□□□ 0.9
CCDC68Q9H2F9 DUX4L7-201ENST00000630678 1275 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms