Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 AC009102.2-201ENST00000606772 1639 ntBASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 AC018445.3-201ENST00000624177 1945 ntBASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SMIM3Q9BZL3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 AC098818.2-201ENST00000564925 2320 ntBASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 PVT1_1.1-201ENST00000615125 194 ntBASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMIM3Q9BZL3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM3Q9BZL3 AL512408.1-201ENST00000569378 2000 ntBASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 AL031602.1-201ENST00000633169 911 ntBASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 AC116562.4-201ENST00000641316 2276 ntBASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM3Q9BZL3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM3Q9BZL3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM3Q9BZL3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM3Q9BZL3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM3Q9BZL3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM3Q9BZL3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM3Q9BZL3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM3Q9BZL3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM3Q9BZL3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
SMIM3Q9BZL3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.88■□□□□ 0.29
SMIM3Q9BZL3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms