Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 NALT1-201ENST00000429224 738 ntTSL 5 BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 RASA4CP-201ENST00000424092 1398 ntBASIC12.29□□□□□ -0.44
LIMD2Q9BT23 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC12.29□□□□□ -0.44
LIMD2Q9BT23 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 AC105233.4-201ENST00000642045 216 ntBASIC12.28□□□□□ -0.44
LIMD2Q9BT23 AC010542.4-201ENST00000563151 1910 ntBASIC12.28□□□□□ -0.44
LIMD2Q9BT23 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 TSPY26P-201ENST00000476365 1326 ntBASIC12.28□□□□□ -0.44
LIMD2Q9BT23 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC12.28□□□□□ -0.44
LIMD2Q9BT23 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
LIMD2Q9BT23 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
LIMD2Q9BT23 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIMD2Q9BT23 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIMD2Q9BT23 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIMD2Q9BT23 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIMD2Q9BT23 AP006587.3-201ENST00000525742 1516 ntBASIC12.27□□□□□ -0.44
LIMD2Q9BT23 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIMD2Q9BT23 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIMD2Q9BT23 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LIMD2Q9BT23 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 AP001330.3-201ENST00000520123 633 ntBASIC12.27□□□□□ -0.45
LIMD2Q9BT23 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 AC133561.4-201ENST00000566112 224 ntBASIC12.27□□□□□ -0.45
LIMD2Q9BT23 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIMD2Q9BT23 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIMD2Q9BT23 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms