Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FOXC2Q99958 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXC2Q99958 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.52■□□□□ 0.39
FOXC2Q99958 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXC2Q99958 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.51■□□□□ 0.39
FOXC2Q99958 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXC2Q99958 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXC2Q99958 AC245052.3-201ENST00000450182 901 ntBASIC17.51■□□□□ 0.39
FOXC2Q99958 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.51■□□□□ 0.39
FOXC2Q99958 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXC2Q99958 AL590326.2-201ENST00000625139 305 ntBASIC17.51■□□□□ 0.39
FOXC2Q99958 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXC2Q99958 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXC2Q99958 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXC2Q99958 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXC2Q99958 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXC2Q99958 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXC2Q99958 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
FOXC2Q99958 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXC2Q99958 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXC2Q99958 AC239809.2-201ENST00000415381 517 ntBASIC17.5■□□□□ 0.39
FOXC2Q99958 TSPY15P-201ENST00000457163 923 ntBASIC17.5■□□□□ 0.39
FOXC2Q99958 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXC2Q99958 AC110285.5-201ENST00000611501 352 ntBASIC17.5■□□□□ 0.39
FOXC2Q99958 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.5■□□□□ 0.39
FOXC2Q99958 AC113410.3-201ENST00000623366 203 ntBASIC17.5■□□□□ 0.39
FOXC2Q99958 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXC2Q99958 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.5■□□□□ 0.39
FOXC2Q99958 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXC2Q99958 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXC2Q99958 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
FOXC2Q99958 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FOXC2Q99958 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXC2Q99958 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXC2Q99958 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXC2Q99958 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXC2Q99958 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.49■□□□□ 0.39
FOXC2Q99958 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.49■□□□□ 0.39
FOXC2Q99958 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.49■□□□□ 0.39
FOXC2Q99958 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
FOXC2Q99958 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.49■□□□□ 0.39
FOXC2Q99958 AL355075.4-201ENST00000554988 638 ntBASIC17.49■□□□□ 0.39
FOXC2Q99958 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
FOXC2Q99958 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
FOXC2Q99958 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FOXC2Q99958 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXC2Q99958 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXC2Q99958 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXC2Q99958 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.48■□□□□ 0.39
FOXC2Q99958 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
FOXC2Q99958 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
FOXC2Q99958 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.48■□□□□ 0.39
FOXC2Q99958 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.48■□□□□ 0.39
FOXC2Q99958 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXC2Q99958 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.48■□□□□ 0.39
FOXC2Q99958 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXC2Q99958 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
FOXC2Q99958 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXC2Q99958 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.48■□□□□ 0.39
FOXC2Q99958 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.48■□□□□ 0.39
FOXC2Q99958 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.48■□□□□ 0.39
FOXC2Q99958 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXC2Q99958 AL023875.1-201ENST00000640777 796 ntBASIC17.48■□□□□ 0.39
FOXC2Q99958 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXC2Q99958 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXC2Q99958 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FOXC2Q99958 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FOXC2Q99958 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.48■□□□□ 0.39
FOXC2Q99958 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 LINC01124-201ENST00000409786 2117 ntBASIC17.47■□□□□ 0.39
FOXC2Q99958 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
FOXC2Q99958 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
FOXC2Q99958 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.47■□□□□ 0.39
FOXC2Q99958 PRKY-204ENST00000533551 1019 ntBASIC17.47■□□□□ 0.39
FOXC2Q99958 RARRES2P10-201ENST00000564312 460 ntBASIC17.47■□□□□ 0.39
FOXC2Q99958 RN7SL850P-201ENST00000579959 291 ntBASIC17.47■□□□□ 0.39
FOXC2Q99958 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
FOXC2Q99958 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.47■□□□□ 0.39
FOXC2Q99958 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FOXC2Q99958 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms