Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NR1H4Q96RI1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 AC139795.1-202ENST00000500444 432 ntBASIC19.51■□□□□ 0.71
NR1H4Q96RI1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
NR1H4Q96RI1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 AC007225.1-201ENST00000566331 1836 ntBASIC19.5■□□□□ 0.71
NR1H4Q96RI1 AL158211.5-201ENST00000623583 2518 ntBASIC19.5■□□□□ 0.71
NR1H4Q96RI1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NR1H4Q96RI1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.49■□□□□ 0.71
NR1H4Q96RI1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 AC004448.1-201ENST00000458332 883 ntBASIC19.48■□□□□ 0.71
NR1H4Q96RI1 ABHD17AP5-201ENST00000580133 923 ntBASIC19.48■□□□□ 0.71
NR1H4Q96RI1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NR1H4Q96RI1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 BHLHE23-202ENST00000612929 1109 ntBASIC19.47■□□□□ 0.71
NR1H4Q96RI1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NR1H4Q96RI1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NR1H4Q96RI1 NTF6A-201ENST00000591175 560 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms