Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 AC093787.1-201ENST00000450396 207 ntBASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 AL591742.1-201ENST00000604433 565 ntBASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
PRICKLE1Q96MT3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 AL355802.2-201ENST00000402069 882 ntBASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 AC105036.2-201ENST00000569468 176 ntBASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PRICKLE1Q96MT3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 AF201337.1-201ENST00000520239 748 ntBASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 AL162412.1-201ENST00000567129 965 ntBASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 Z98882.1-201ENST00000622160 2253 ntBASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.42■■□□□ 1.02
PRICKLE1Q96MT3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PRICKLE1Q96MT3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 AC069236.1-201ENST00000604339 616 ntBASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 OR10C1-204ENST00000622521 1039 ntBASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PRICKLE1Q96MT3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
PRICKLE1Q96MT3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PRICKLE1Q96MT3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PRICKLE1Q96MT3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PRICKLE1Q96MT3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.39■■□□□ 1.01
PRICKLE1Q96MT3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.39■■□□□ 1.01
PRICKLE1Q96MT3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PRICKLE1Q96MT3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
PRICKLE1Q96MT3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PRICKLE1Q96MT3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.39■■□□□ 1.01
PRICKLE1Q96MT3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms