Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC32.12■■■□□ 2.73
CCNB3Q8WWL7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 CDV3P1-201ENST00000471403 739 ntBASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
CCNB3Q8WWL7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC32.1■■■□□ 2.73
CCNB3Q8WWL7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CCNB3Q8WWL7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC32.1■■■□□ 2.73
CCNB3Q8WWL7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC32.1■■■□□ 2.73
CCNB3Q8WWL7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC32.1■■■□□ 2.73
CCNB3Q8WWL7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CCNB3Q8WWL7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CCNB3Q8WWL7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CCNB3Q8WWL7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CCNB3Q8WWL7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
CCNB3Q8WWL7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CCNB3Q8WWL7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CCNB3Q8WWL7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CCNB3Q8WWL7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CCNB3Q8WWL7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
CCNB3Q8WWL7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CCNB3Q8WWL7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CCNB3Q8WWL7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC32.09■■■□□ 2.73
CCNB3Q8WWL7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CCNB3Q8WWL7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 NME6-213ENST00000451657 871 ntTSL 2 BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CCNB3Q8WWL7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC32.07■■■□□ 2.73
CCNB3Q8WWL7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.73
CCNB3Q8WWL7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC32.07■■■□□ 2.73
CCNB3Q8WWL7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CCNB3Q8WWL7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
CCNB3Q8WWL7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC32.07■■■□□ 2.72
CCNB3Q8WWL7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC32.07■■■□□ 2.72
CCNB3Q8WWL7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CCNB3Q8WWL7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CCNB3Q8WWL7 AC073648.6-201ENST00000641589 218 ntBASIC32.07■■■□□ 2.72
CCNB3Q8WWL7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CCNB3Q8WWL7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CCNB3Q8WWL7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
CCNB3Q8WWL7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CCNB3Q8WWL7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CCNB3Q8WWL7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CCNB3Q8WWL7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC32.06■■■□□ 2.72
CCNB3Q8WWL7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CCNB3Q8WWL7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC32.06■■■□□ 2.72
CCNB3Q8WWL7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC32.06■■■□□ 2.72
CCNB3Q8WWL7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CCNB3Q8WWL7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 MCRIP2P1-201ENST00000394346 511 ntBASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 AC060766.5-201ENST00000590539 871 ntBASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CCNB3Q8WWL7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 AL158047.1-201ENST00000445918 881 ntBASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 AC008403.3-201ENST00000598924 454 ntBASIC32.04■■■□□ 2.72
CCNB3Q8WWL7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC32.03■■■□□ 2.72
CCNB3Q8WWL7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
CCNB3Q8WWL7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CCNB3Q8WWL7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC32.03■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms