Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 LSM12P1-201ENST00000411836 588 ntBASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 AL355472.2-201ENST00000422958 438 ntBASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF2Q8TEC5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 POU5F1P3-201ENST00000428824 1078 ntBASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF2Q8TEC5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.54■■□□□ 1.04
SH3RF2Q8TEC5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.54■■□□□ 1.04
SH3RF2Q8TEC5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.54■■□□□ 1.04
SH3RF2Q8TEC5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF2Q8TEC5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF2Q8TEC5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF2Q8TEC5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.54■■□□□ 1.04
SH3RF2Q8TEC5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF2Q8TEC5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SH3RF2Q8TEC5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF2Q8TEC5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF2Q8TEC5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 KRT17P1-201ENST00000399211 1546 ntBASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.53■■□□□ 1.04
SH3RF2Q8TEC5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF2Q8TEC5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF2Q8TEC5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF2Q8TEC5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3RF2Q8TEC5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SH3RF2Q8TEC5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.52■■□□□ 1.04
SH3RF2Q8TEC5 AC100791.3-201ENST00000617619 330 ntBASIC21.52■■□□□ 1.04
SH3RF2Q8TEC5 AC007375.3-201ENST00000600936 2314 ntBASIC21.52■■□□□ 1.04
SH3RF2Q8TEC5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.52■■□□□ 1.04
SH3RF2Q8TEC5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.52■■□□□ 1.04
SH3RF2Q8TEC5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 CYP2T3P-201ENST00000601990 817 ntBASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3RF2Q8TEC5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.5■■□□□ 1.03
SH3RF2Q8TEC5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms