Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
SVIPQ8NHG7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SVIPQ8NHG7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SVIPQ8NHG7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SVIPQ8NHG7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.13□□□□□ -0.31
SVIPQ8NHG7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SVIPQ8NHG7 CICP23-201ENST00000605013 2741 ntBASIC13.12□□□□□ -0.31
SVIPQ8NHG7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms