Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 KRT17P3-201ENST00000420566 1262 ntBASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 LINC00526-201ENST00000581067 1875 ntBASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 REXO1L12P-201ENST00000622156 912 ntBASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF248Q8NDW4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 AC211429.1-201ENST00000415277 523 ntBASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 CYP2T3P-201ENST00000601990 817 ntBASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 LINC01023-201ENST00000606054 436 ntBASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF248Q8NDW4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 AC010331.1-201ENST00000611423 582 ntBASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF248Q8NDW4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF248Q8NDW4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 KRT17P1-201ENST00000399211 1546 ntBASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 SNORA78-201ENST00000459373 127 ntBASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms