Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZNF439Q8NDP4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 AC138907.5-202ENST00000569484 235 ntBASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF439Q8NDP4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 CCDC92B-201ENST00000575506 885 ntBASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF439Q8NDP4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF439Q8NDP4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 AP004607.4-201ENST00000530158 1459 ntBASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF439Q8NDP4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 POU5F1P4-201ENST00000413175 1085 ntBASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 AC010141.2-201ENST00000452426 721 ntBASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 KRT18P14-201ENST00000534205 1250 ntBASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 AL121603.2-201ENST00000557373 2117 ntBASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms