Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC44A5Q8NCS7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 CYP2T3P-201ENST00000601990 817 ntBASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 AC244015.2-201ENST00000616358 1861 ntBASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.47■■□□□ 1.51
SLC44A5Q8NCS7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.46■■□□□ 1.51
SLC44A5Q8NCS7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SLC44A5Q8NCS7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.51
SLC44A5Q8NCS7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
SLC44A5Q8NCS7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SLC44A5Q8NCS7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC44A5Q8NCS7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 SAPCD2P1-201ENST00000395413 1184 ntBASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 LSM12P1-201ENST00000411836 588 ntBASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 Z98882.1-201ENST00000622160 2253 ntBASIC24.44■■□□□ 1.5
SLC44A5Q8NCS7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.43■■□□□ 1.5
SLC44A5Q8NCS7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.43■■□□□ 1.5
SLC44A5Q8NCS7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC44A5Q8NCS7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SLC44A5Q8NCS7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SLC44A5Q8NCS7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
SLC44A5Q8NCS7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC44A5Q8NCS7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SLC44A5Q8NCS7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.43■■□□□ 1.5
SLC44A5Q8NCS7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC44A5Q8NCS7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC44A5Q8NCS7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 AC097658.1-201ENST00000475555 843 ntBASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 AC100791.3-201ENST00000617619 330 ntBASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SLC44A5Q8NCS7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
SLC44A5Q8NCS7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.41■■□□□ 1.5
SLC44A5Q8NCS7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms