Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 SLC7A5P2-201ENST00000553010 536 ntBASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 KRT16P2-201ENST00000414673 1423 ntBASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 AL391422.3-201ENST00000603791 2761 ntBASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 AC121338.2-201ENST00000622535 1744 ntBASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE9Q8IYJ1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 AC097381.1-201ENST00000429019 1296 ntBASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 AC087623.3-201ENST00000607047 1098 ntBASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 AC120498.10-201ENST00000621827 505 ntBASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 AC006128.1-201ENST00000624704 1661 ntBASIC20.45■□□□□ 0.86
CPNE9Q8IYJ1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE9Q8IYJ1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 MIR6821-201ENST00000617625 74 ntBASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 RARRES2P11-201ENST00000635158 484 ntBASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CPNE9Q8IYJ1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPNE9Q8IYJ1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms