Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.55■□□□□ 0.88
NUDCD3Q8IVD9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 FP700111.2-201ENST00000619190 1892 ntBASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUDCD3Q8IVD9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 AC112907.3-201ENST00000577781 2400 ntBASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUDCD3Q8IVD9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.52■□□□□ 0.88
NUDCD3Q8IVD9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.52■□□□□ 0.88
NUDCD3Q8IVD9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUDCD3Q8IVD9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.52■□□□□ 0.88
NUDCD3Q8IVD9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.52■□□□□ 0.88
NUDCD3Q8IVD9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.52■□□□□ 0.88
NUDCD3Q8IVD9 GUSBP5-201ENST00000418136 578 ntBASIC20.52■□□□□ 0.88
NUDCD3Q8IVD9 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.52■□□□□ 0.88
NUDCD3Q8IVD9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.52■□□□□ 0.88
NUDCD3Q8IVD9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUDCD3Q8IVD9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NUDCD3Q8IVD9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NUDCD3Q8IVD9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NUDCD3Q8IVD9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.52■□□□□ 0.87
NUDCD3Q8IVD9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 AL512408.1-201ENST00000569378 2000 ntBASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 AL162377.1-201ENST00000618844 1793 ntBASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUDCD3Q8IVD9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms