Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PACS2Q86VP3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PACS2Q86VP3 AL512631.2-201ENST00000604634 923 ntBASIC20.75■□□□□ 0.91
PACS2Q86VP3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PACS2Q86VP3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PACS2Q86VP3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PACS2Q86VP3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PACS2Q86VP3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PACS2Q86VP3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PACS2Q86VP3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS2Q86VP3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PACS2Q86VP3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
PACS2Q86VP3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PACS2Q86VP3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.74■□□□□ 0.91
PACS2Q86VP3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PACS2Q86VP3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS2Q86VP3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.74■□□□□ 0.91
PACS2Q86VP3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS2Q86VP3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.74■□□□□ 0.91
PACS2Q86VP3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.74■□□□□ 0.91
PACS2Q86VP3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
PACS2Q86VP3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PACS2Q86VP3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.74■□□□□ 0.91
PACS2Q86VP3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS2Q86VP3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PACS2Q86VP3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS2Q86VP3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PACS2Q86VP3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.74■□□□□ 0.91
PACS2Q86VP3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS2Q86VP3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PACS2Q86VP3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS2Q86VP3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS2Q86VP3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.73■□□□□ 0.91
PACS2Q86VP3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.73■□□□□ 0.91
PACS2Q86VP3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS2Q86VP3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS2Q86VP3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS2Q86VP3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.73■□□□□ 0.91
PACS2Q86VP3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS2Q86VP3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS2Q86VP3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PACS2Q86VP3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.73■□□□□ 0.91
PACS2Q86VP3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.73■□□□□ 0.91
PACS2Q86VP3 MIR4466-201ENST00000606121 54 ntBASIC20.73■□□□□ 0.91
PACS2Q86VP3 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.73■□□□□ 0.91
PACS2Q86VP3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS2Q86VP3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PACS2Q86VP3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PACS2Q86VP3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS2Q86VP3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.73■□□□□ 0.91
PACS2Q86VP3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PACS2Q86VP3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PACS2Q86VP3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PACS2Q86VP3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
PACS2Q86VP3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PACS2Q86VP3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.72■□□□□ 0.91
PACS2Q86VP3 SRD5A1P1-201ENST00000442297 786 ntBASIC20.72■□□□□ 0.91
PACS2Q86VP3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.72■□□□□ 0.91
PACS2Q86VP3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PACS2Q86VP3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.72■□□□□ 0.91
PACS2Q86VP3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PACS2Q86VP3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PACS2Q86VP3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.72■□□□□ 0.91
PACS2Q86VP3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
PACS2Q86VP3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
PACS2Q86VP3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PACS2Q86VP3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.72■□□□□ 0.91
PACS2Q86VP3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
PACS2Q86VP3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PACS2Q86VP3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS2Q86VP3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS2Q86VP3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PACS2Q86VP3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS2Q86VP3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PACS2Q86VP3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PACS2Q86VP3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.71■□□□□ 0.91
PACS2Q86VP3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS2Q86VP3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PACS2Q86VP3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
PACS2Q86VP3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS2Q86VP3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PACS2Q86VP3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PACS2Q86VP3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PACS2Q86VP3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PACS2Q86VP3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.71■□□□□ 0.91
PACS2Q86VP3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PACS2Q86VP3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PACS2Q86VP3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PACS2Q86VP3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.7■□□□□ 0.9
PACS2Q86VP3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PACS2Q86VP3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PACS2Q86VP3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PACS2Q86VP3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.7■□□□□ 0.9
PACS2Q86VP3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PACS2Q86VP3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PACS2Q86VP3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PACS2Q86VP3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
PACS2Q86VP3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
PACS2Q86VP3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PACS2Q86VP3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms