Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 TMPOP1-202ENST00000424642 1267 ntBASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 KRT18P35-201ENST00000510488 1269 ntBASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.91□□□□□ -0.34
VPS13BQ7Z7G8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 ARMC10P1-201ENST00000313754 855 ntBASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 TSPY7P-201ENST00000431358 1114 ntBASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 MIR4785-201ENST00000585005 73 ntBASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 MTDHP1-201ENST00000605323 784 ntBASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13BQ7Z7G8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
VPS13BQ7Z7G8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
VPS13BQ7Z7G8 AC080038.3-201ENST00000623346 1952 ntBASIC12.9□□□□□ -0.35
VPS13BQ7Z7G8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 AC145285.6-201ENST00000604632 637 ntBASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 CD177P1-201ENST00000606252 935 ntBASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC12.89□□□□□ -0.35
VPS13BQ7Z7G8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 AC087499.1-201ENST00000418141 1075 ntBASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 AC008175.2-201ENST00000612840 297 ntBASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13BQ7Z7G8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 AC092865.7-201ENST00000641832 219 ntBASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms