Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LYSMD3Q7Z3D4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LYSMD3Q7Z3D4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LYSMD3Q7Z3D4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.83■□□□□ 0.93
LYSMD3Q7Z3D4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.83■□□□□ 0.93
LYSMD3Q7Z3D4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.83■□□□□ 0.93
LYSMD3Q7Z3D4 AC090192.1-201ENST00000517740 490 ntBASIC20.83■□□□□ 0.93
LYSMD3Q7Z3D4 DUX4L16-201ENST00000555130 1264 ntBASIC20.83■□□□□ 0.93
LYSMD3Q7Z3D4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
LYSMD3Q7Z3D4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LYSMD3Q7Z3D4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LYSMD3Q7Z3D4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 TERF1P5-201ENST00000477545 1207 ntBASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 AC080038.1-201ENST00000611274 1154 ntBASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 AC243732.1-201ENST00000612648 864 ntBASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD3Q7Z3D4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LYSMD3Q7Z3D4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD3Q7Z3D4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 AC073111.5-205ENST00000641717 521 ntBASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD3Q7Z3D4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 CNN2P6-201ENST00000439038 900 ntBASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 AC013268.1-206ENST00000638368 961 ntBASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 AC112229.1-201ENST00000639295 961 ntBASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD3Q7Z3D4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 AC091799.1-201ENST00000422823 811 ntBASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms