Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST2H3AQ71DI3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 AC120498.10-201ENST00000621827 505 ntBASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST2H3AQ71DI3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 SLC7A5P2-201ENST00000553010 536 ntBASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 KRT18P61-201ENST00000585825 1298 ntBASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST2H3AQ71DI3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 AC097381.1-201ENST00000429019 1296 ntBASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 SLC7A5P1-201ENST00000568957 537 ntBASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 AC011484.1-201ENST00000377652 1995 ntBASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIST2H3AQ71DI3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
HIST2H3AQ71DI3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 MIR6821-201ENST00000617625 74 ntBASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIST2H3AQ71DI3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIST2H3AQ71DI3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 692.1 ms