Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.22■■□□□ 1.15
DCLRE1AQ6PJP8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 AC008687.6-201ENST00000596318 630 ntBASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 KRT17P1-201ENST00000399211 1546 ntBASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.21■■□□□ 1.15
DCLRE1AQ6PJP8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
DCLRE1AQ6PJP8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
DCLRE1AQ6PJP8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
DCLRE1AQ6PJP8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DCLRE1AQ6PJP8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
DCLRE1AQ6PJP8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.19■■□□□ 1.14
DCLRE1AQ6PJP8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.19■■□□□ 1.14
DCLRE1AQ6PJP8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.19■■□□□ 1.14
DCLRE1AQ6PJP8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DCLRE1AQ6PJP8 AC116050.2-201ENST00000612102 1779 ntBASIC22.19■■□□□ 1.14
DCLRE1AQ6PJP8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DCLRE1AQ6PJP8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
DCLRE1AQ6PJP8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DCLRE1AQ6PJP8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DCLRE1AQ6PJP8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 KRT18P68-201ENST00000392293 1000 ntBASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 POU5F1P3-201ENST00000428824 1078 ntBASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 AL589743.5-201ENST00000616611 1050 ntBASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
DCLRE1AQ6PJP8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DCLRE1AQ6PJP8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DCLRE1AQ6PJP8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DCLRE1AQ6PJP8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.15■■□□□ 1.14
DCLRE1AQ6PJP8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DCLRE1AQ6PJP8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DCLRE1AQ6PJP8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DCLRE1AQ6PJP8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms