Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
TMEM88Q6PEY1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88Q6PEY1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 AC022616.5-201ENST00000518796 181 ntBASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM88Q6PEY1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 AC009299.2-201ENST00000482477 511 ntBASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88Q6PEY1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TMEM88Q6PEY1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88Q6PEY1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM88Q6PEY1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms