Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.7■■□□□ 1.06
RNF43Q68DV7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
RNF43Q68DV7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF43Q68DV7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
RNF43Q68DV7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF43Q68DV7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF43Q68DV7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RNF43Q68DV7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF43Q68DV7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
RNF43Q68DV7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF43Q68DV7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF43Q68DV7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF43Q68DV7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF43Q68DV7 CNN2P6-201ENST00000439038 900 ntBASIC21.69■■□□□ 1.06
RNF43Q68DV7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF43Q68DV7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF43Q68DV7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF43Q68DV7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF43Q68DV7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF43Q68DV7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF43Q68DV7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF43Q68DV7 POU5F1P4-201ENST00000413175 1085 ntBASIC21.68■■□□□ 1.06
RNF43Q68DV7 SLC7A5P2-201ENST00000553010 536 ntBASIC21.68■■□□□ 1.06
RNF43Q68DV7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF43Q68DV7 AC010536.3-201ENST00000620306 533 ntBASIC21.68■■□□□ 1.06
RNF43Q68DV7 AC231657.2-201ENST00000624556 255 ntBASIC21.68■■□□□ 1.06
RNF43Q68DV7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF43Q68DV7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF43Q68DV7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.68■■□□□ 1.06
RNF43Q68DV7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF43Q68DV7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF43Q68DV7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF43Q68DV7 AC244015.2-201ENST00000616358 1861 ntBASIC21.68■■□□□ 1.06
RNF43Q68DV7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF43Q68DV7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
RNF43Q68DV7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF43Q68DV7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RNF43Q68DV7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
RNF43Q68DV7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF43Q68DV7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF43Q68DV7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RNF43Q68DV7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF43Q68DV7 FAM201B-201ENST00000458407 597 ntBASIC21.67■■□□□ 1.06
RNF43Q68DV7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF43Q68DV7 AC083906.2-201ENST00000511578 360 ntBASIC21.67■■□□□ 1.06
RNF43Q68DV7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF43Q68DV7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF43Q68DV7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF43Q68DV7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF43Q68DV7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF43Q68DV7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF43Q68DV7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF43Q68DV7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF43Q68DV7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF43Q68DV7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF43Q68DV7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF43Q68DV7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF43Q68DV7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF43Q68DV7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF43Q68DV7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF43Q68DV7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF43Q68DV7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF43Q68DV7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RNF43Q68DV7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RNF43Q68DV7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF43Q68DV7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RNF43Q68DV7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF43Q68DV7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF43Q68DV7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF43Q68DV7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF43Q68DV7 KRT16P2-201ENST00000414673 1423 ntBASIC21.65■■□□□ 1.06
RNF43Q68DV7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF43Q68DV7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RNF43Q68DV7 TSPY6P-201ENST00000448518 926 ntBASIC21.65■■□□□ 1.06
RNF43Q68DV7 AC093827.2-201ENST00000512654 315 ntBASIC21.65■■□□□ 1.06
RNF43Q68DV7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.65■■□□□ 1.06
RNF43Q68DV7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RNF43Q68DV7 AC008175.2-201ENST00000612840 297 ntBASIC21.65■■□□□ 1.06
RNF43Q68DV7 AL050303.2-201ENST00000619798 666 ntBASIC21.65■■□□□ 1.06
RNF43Q68DV7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF43Q68DV7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
RNF43Q68DV7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF43Q68DV7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF43Q68DV7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF43Q68DV7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF43Q68DV7 LINC01521-201ENST00000504184 1943 ntBASIC21.65■■□□□ 1.06
RNF43Q68DV7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF43Q68DV7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF43Q68DV7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
RNF43Q68DV7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF43Q68DV7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.64■■□□□ 1.06
RNF43Q68DV7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF43Q68DV7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF43Q68DV7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF43Q68DV7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF43Q68DV7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF43Q68DV7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF43Q68DV7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF43Q68DV7 AC007322.4-201ENST00000509611 723 ntBASIC21.64■■□□□ 1.05
RNF43Q68DV7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms