Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 AC105020.6-201ENST00000621523 1217 ntBASIC20.25■□□□□ 0.83
HLA-BQ31612 REXO1L12P-201ENST00000622156 912 ntBASIC20.25■□□□□ 0.83
HLA-BQ31612 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
HLA-BQ31612 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.25■□□□□ 0.83
HLA-BQ31612 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.25■□□□□ 0.83
HLA-BQ31612 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HLA-BQ31612 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.25■□□□□ 0.83
HLA-BQ31612 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HLA-BQ31612 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-BQ31612 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-BQ31612 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.24■□□□□ 0.83
HLA-BQ31612 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.24■□□□□ 0.83
HLA-BQ31612 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HLA-BQ31612 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.24■□□□□ 0.83
HLA-BQ31612 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HLA-BQ31612 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-BQ31612 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.24■□□□□ 0.83
HLA-BQ31612 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-BQ31612 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.23■□□□□ 0.83
HLA-BQ31612 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-BQ31612 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-BQ31612 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-BQ31612 AC211429.1-201ENST00000415277 523 ntBASIC20.23■□□□□ 0.83
HLA-BQ31612 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HLA-BQ31612 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.23■□□□□ 0.83
HLA-BQ31612 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-BQ31612 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-BQ31612 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-BQ31612 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HLA-BQ31612 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-BQ31612 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-BQ31612 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-BQ31612 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-BQ31612 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.22■□□□□ 0.83
HLA-BQ31612 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HLA-BQ31612 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HLA-BQ31612 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
HLA-BQ31612 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-BQ31612 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-BQ31612 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HLA-BQ31612 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-BQ31612 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-BQ31612 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-BQ31612 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-BQ31612 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HLA-BQ31612 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-BQ31612 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-BQ31612 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-BQ31612 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-BQ31612 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-BQ31612 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-BQ31612 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HLA-BQ31612 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-BQ31612 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-BQ31612 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-BQ31612 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-BQ31612 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-BQ31612 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
HLA-BQ31612 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-BQ31612 FAM99A-202ENST00000538190 1989 ntBASIC20.21■□□□□ 0.83
HLA-BQ31612 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-BQ31612 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.21■□□□□ 0.83
HLA-BQ31612 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
HLA-BQ31612 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HLA-BQ31612 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-BQ31612 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-BQ31612 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-BQ31612 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-BQ31612 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-BQ31612 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-BQ31612 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.2■□□□□ 0.82
HLA-BQ31612 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-BQ31612 C2orf69P4-201ENST00000565394 541 ntBASIC20.2■□□□□ 0.82
HLA-BQ31612 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-BQ31612 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-BQ31612 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-BQ31612 AC116050.2-201ENST00000612102 1779 ntBASIC20.2■□□□□ 0.82
HLA-BQ31612 AC127496.7-201ENST00000625110 1798 ntBASIC20.2■□□□□ 0.82
HLA-BQ31612 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-BQ31612 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-BQ31612 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-BQ31612 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-BQ31612 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HLA-BQ31612 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-BQ31612 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms