Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 CHC1YGL206C 4962 nt0.85□□□□□ -2.27
VPS13Q07878 HOS4YIL112W 3252 nt0.85□□□□□ -2.27
VPS13Q07878 DUF1YOL087C 3351 nt0.84□□□□□ -2.27
VPS13Q07878 COG2YGR120C 789 nt0.84□□□□□ -2.27
VPS13Q07878 SUR1YPL057C 1149 nt0.84□□□□□ -2.27
VPS13Q07878 GYL1YMR192W 2163 nt0.84□□□□□ -2.28
VPS13Q07878 YFL002W-AYFL002W-A 5313 nt0.84□□□□□ -2.28
VPS13Q07878 YGR161W-BYGR161W-B 5313 nt0.84□□□□□ -2.28
VPS13Q07878 YCL019WYCL019W 5313 nt0.84□□□□□ -2.28
VPS13Q07878 IMH1YLR309C 2736 nt0.84□□□□□ -2.28
VPS13Q07878 YGR111WYGR111W 1203 nt0.83□□□□□ -2.28
VPS13Q07878 RLI1YDR091C 1827 nt0.83□□□□□ -2.28
VPS13Q07878 PKH2YOL100W 3246 nt0.83□□□□□ -2.28
VPS13Q07878 RNA14YMR061W 2034 nt0.82□□□□□ -2.28
VPS13Q07878 YBR174CYBR174C 315 nt0.82□□□□□ -2.28
VPS13Q07878 MNL2YLR057W 2550 nt0.82□□□□□ -2.28
VPS13Q07878 YOL166CYOL166C 339 nt0.82□□□□□ -2.28
VPS13Q07878 DPB3YBR278W 606 nt0.82□□□□□ -2.28
VPS13Q07878 PUT2YHR037W 1728 nt0.82□□□□□ -2.28
VPS13Q07878 ERP4YOR016C 624 nt0.82□□□□□ -2.28
VPS13Q07878 SDC1YDR469W 528 nt0.81□□□□□ -2.28
VPS13Q07878 INP51YIL002C 2841 nt0.81□□□□□ -2.28
VPS13Q07878 SPC97YHR172W 2472 nt0.8□□□□□ -2.28
VPS13Q07878 RSM22YKL155C 1887 nt0.8□□□□□ -2.28
VPS13Q07878 SPI1YER150W 447 nt0.8□□□□□ -2.28
VPS13Q07878 YIR020C-BYIR020C-B 735 nt0.8□□□□□ -2.28
VPS13Q07878 TPK3YKL166C 1197 nt0.8□□□□□ -2.28
VPS13Q07878 UFD2YDL190C 2886 nt0.8□□□□□ -2.28
VPS13Q07878 SPO22YIL073C 2928 nt0.8□□□□□ -2.28
VPS13Q07878 SWI6YLR182W 2412 nt0.8□□□□□ -2.28
VPS13Q07878 YPR1YDR368W 939 nt0.8□□□□□ -2.28
VPS13Q07878 FIP1YJR093C 984 nt0.8□□□□□ -2.28
VPS13Q07878 YBR096WYBR096W 693 nt0.79□□□□□ -2.28
VPS13Q07878 SPR3YGR059W 1539 nt0.79□□□□□ -2.28
VPS13Q07878 SPT7YBR081C 3999 nt0.79□□□□□ -2.28
VPS13Q07878 YGL165CYGL165C 579 nt0.79□□□□□ -2.28
VPS13Q07878 DSE4YNR067C 3354 nt0.79□□□□□ -2.28
VPS13Q07878 TFB1YDR311W 1929 nt0.78□□□□□ -2.28
VPS13Q07878 MAC1YMR021C 1254 nt0.78□□□□□ -2.28
VPS13Q07878 EPO1YMR124W 2832 nt0.78□□□□□ -2.28
VPS13Q07878 YGR273CYGR273C 525 nt0.78□□□□□ -2.28
VPS13Q07878 YDR338CYDR338C 2088 nt0.78□□□□□ -2.29
VPS13Q07878 IRR1YIL026C 3453 nt0.78□□□□□ -2.29
VPS13Q07878 HHF1YBR009C 312 nt0.78□□□□□ -2.29
VPS13Q07878 ASI3YNL008C 2031 nt0.77□□□□□ -2.29
VPS13Q07878 MAK5YBR142W 2322 nt0.77□□□□□ -2.29
VPS13Q07878 ECM1YAL059W 639 nt0.77□□□□□ -2.29
VPS13Q07878 GAL7YBR018C 1101 nt0.77□□□□□ -2.29
VPS13Q07878 YMR160WYMR160W 2451 nt0.77□□□□□ -2.29
VPS13Q07878 SEC15YGL233W 2733 nt0.77□□□□□ -2.29
VPS13Q07878 REC102YLR329W 795 nt0.77□□□□□ -2.29
VPS13Q07878 BUL2YML111W 2763 nt0.77□□□□□ -2.29
VPS13Q07878 PMD1YER132C 5262 nt0.77□□□□□ -2.29
VPS13Q07878 YLR050CYLR050C 486 nt0.76□□□□□ -2.29
VPS13Q07878 YLR076CYLR076C 423 nt0.76□□□□□ -2.29
VPS13Q07878 YJL007CYJL007C 315 nt0.76□□□□□ -2.29
VPS13Q07878 IRC3YDR332W 2070 nt0.76□□□□□ -2.29
VPS13Q07878 YCR081C-AYCR081C-A 237 nt0.75□□□□□ -2.29
VPS13Q07878 PHO81YGR233C 3537 nt0.75□□□□□ -2.29
VPS13Q07878 SHR3YDL212W 633 nt0.75□□□□□ -2.29
VPS13Q07878 FBP26YJL155C 1359 nt0.75□□□□□ -2.29
VPS13Q07878 YGR283CYGR283C 1026 nt0.75□□□□□ -2.29
VPS13Q07878 RSA3YLR221C 663 nt0.75□□□□□ -2.29
VPS13Q07878 YPR097WYPR097W 3222 nt0.75□□□□□ -2.29
VPS13Q07878 SEC4YFL005W 648 nt0.74□□□□□ -2.29
VPS13Q07878 REH1YLR387C 1299 nt0.74□□□□□ -2.29
VPS13Q07878 YNL203CYNL203C 612 nt0.74□□□□□ -2.29
VPS13Q07878 AIM18YHR198C 966 nt0.73□□□□□ -2.29
VPS13Q07878 RPH1YER169W 2391 nt0.73□□□□□ -2.29
VPS13Q07878 YGR290WYGR290W 444 nt0.73□□□□□ -2.29
VPS13Q07878 YDR381C-AYDR381C-A 345 nt0.73□□□□□ -2.29
VPS13Q07878 PRP18YGR006W 756 nt0.73□□□□□ -2.29
VPS13Q07878 YMR141CYMR141C 309 nt0.73□□□□□ -2.29
VPS13Q07878 RPL16BYNL069C 597 nt0.73□□□□□ -2.29
VPS13Q07878 SKN7YHR206W 1869 nt0.72□□□□□ -2.29
VPS13Q07878 PRP16YKR086W 3216 nt0.72□□□□□ -2.29
VPS13Q07878 YBR103C-AYBR103C-A 144 nt0.72□□□□□ -2.29
VPS13Q07878 HCS1YKL017C 2052 nt0.72□□□□□ -2.29
VPS13Q07878 FIG2YCR089W 4830 nt0.72□□□□□ -2.29
VPS13Q07878 NRP1YDL167C 2160 nt0.72□□□□□ -2.29
VPS13Q07878 LSM1YJL124C 519 nt0.71□□□□□ -2.3
VPS13Q07878 MNT3YIL014W 1893 nt0.71□□□□□ -2.3
VPS13Q07878 TFB4YPR056W 1017 nt0.71□□□□□ -2.3
VPS13Q07878 RIF1YBR275C 5751 nt0.71□□□□□ -2.3
VPS13Q07878 YDR098C-AYDR098C-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YDR210C-CYDR210C-C 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YDR261C-CYDR261C-C 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YDR316W-AYDR316W-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YDR365W-AYDR365W-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YER137C-AYER137C-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YER159C-AYER159C-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YGR027W-AYGR027W-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YGR038C-AYGR038C-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YGR161C-CYGR161C-C 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YJR026WYJR026W 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YJR028WYJR028W 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YAR010CYAR010C 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YLR157C-AYLR157C-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YLR227W-AYLR227W-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YLR256W-AYLR256W-A 1323 nt0.71□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 46.6 ms