Protein–RNA interactions for Protein: Q00723

PRP38, Pre-mRNA-splicing factor 38, yeastyeast

Predicted RBP Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP38Q00723 YOR277CYOR277C 309 nt2.52□□□□□ -2.01
PRP38Q00723 HAA1YPR008W 2085 nt2.52□□□□□ -2.01
PRP38Q00723 BUB1YGR188C 3066 nt2.52□□□□□ -2.01
PRP38Q00723 BNI4YNL233W 2679 nt2.52□□□□□ -2.01
PRP38Q00723 YLR108CYLR108C 1458 nt2.52□□□□□ -2.01
PRP38Q00723 RGR1YLR071C 3249 nt2.51□□□□□ -2.01
PRP38Q00723 NUM1YDR150W 8247 nt2.51□□□□□ -2.01
PRP38Q00723 NOP12YOL041C 1380 nt2.51□□□□□ -2.01
PRP38Q00723 PDR1YGL013C 3207 nt2.51□□□□□ -2.01
PRP38Q00723 YDR042CYDR042C 603 nt2.51□□□□□ -2.01
PRP38Q00723 YFR054CYFR054C 579 nt2.51□□□□□ -2.01
PRP38Q00723 RPL27AYHR010W 411 nt2.51□□□□□ -2.01
PRP38Q00723 GIM5YML094W 492 nt2.51□□□□□ -2.01
PRP38Q00723 AIM4YBR194W 372 nt2.51□□□□□ -2.01
PRP38Q00723 YCL002CYCL002C 792 nt2.51□□□□□ -2.01
PRP38Q00723 CWH41YGL027C 2502 nt2.51□□□□□ -2.01
PRP38Q00723 YKL100CYKL100C 1764 nt2.51□□□□□ -2.01
PRP38Q00723 GEA1YJR031C 4227 nt2.5□□□□□ -2.01
PRP38Q00723 SAP1YER047C 2694 nt2.5□□□□□ -2.01
PRP38Q00723 KEL2YGR238C 2649 nt2.5□□□□□ -2.01
PRP38Q00723 ANR2YKL047W 1551 nt2.5□□□□□ -2.01
PRP38Q00723 ATP22YDR350C 2055 nt2.5□□□□□ -2.01
PRP38Q00723 RSM28YDR494W 1086 nt2.5□□□□□ -2.01
PRP38Q00723 EMI1YDR512C 564 nt2.5□□□□□ -2.01
PRP38Q00723 YJL169WYJL169W 369 nt2.5□□□□□ -2.01
PRP38Q00723 ARC18YLR370C 537 nt2.5□□□□□ -2.01
PRP38Q00723 YOR152CYOR152C 771 nt2.5□□□□□ -2.01
PRP38Q00723 YPL119C-AYPL119C-A 264 nt2.5□□□□□ -2.01
PRP38Q00723 ICR1ICR1 3199 nt2.5□□□□□ -2.01
PRP38Q00723 YDR239CYDR239C 2364 nt2.5□□□□□ -2.01
PRP38Q00723 MRD1YPR112C 2664 nt2.49□□□□□ -2.01
PRP38Q00723 BRE5YNR051C 1548 nt2.49□□□□□ -2.01
PRP38Q00723 RSM24YDR175C 960 nt2.49□□□□□ -2.01
PRP38Q00723 YFR009W-AYFR009W-A 258 nt2.49□□□□□ -2.01
PRP38Q00723 VEL1YGL258W 621 nt2.49□□□□□ -2.01
PRP38Q00723 tW(CCA)G1tW(CCA)G1 72 nt2.49□□□□□ -2.01
PRP38Q00723 tW(CCA)G2tW(CCA)G2 72 nt2.49□□□□□ -2.01
PRP38Q00723 tW(CCA)JtW(CCA)J 72 nt2.49□□□□□ -2.01
PRP38Q00723 tW(CCA)KtW(CCA)K 72 nt2.49□□□□□ -2.01
PRP38Q00723 tW(CCA)MtW(CCA)M 72 nt2.49□□□□□ -2.01
PRP38Q00723 tW(CCA)PtW(CCA)P 72 nt2.49□□□□□ -2.01
PRP38Q00723 SYS1YJL004C 612 nt2.49□□□□□ -2.01
PRP38Q00723 YKL066WYKL066W 444 nt2.49□□□□□ -2.01
PRP38Q00723 YKL123WYKL123W 381 nt2.49□□□□□ -2.01
PRP38Q00723 YNL203CYNL203C 612 nt2.49□□□□□ -2.01
PRP38Q00723 ADF1YCL058W-A 342 nt2.49□□□□□ -2.01
PRP38Q00723 REF2YDR195W 1602 nt2.49□□□□□ -2.01
PRP38Q00723 RIM13YMR154C 2184 nt2.49□□□□□ -2.01
PRP38Q00723 PRP8YHR165C 7242 nt2.48□□□□□ -2.01
PRP38Q00723 SLK19YOR195W 2466 nt2.48□□□□□ -2.01
PRP38Q00723 YJL132WYJL132W 2253 nt2.48□□□□□ -2.01
PRP38Q00723 ARP8YOR141C 2646 nt2.48□□□□□ -2.01
PRP38Q00723 PDR3YBL005W 2931 nt2.48□□□□□ -2.01
PRP38Q00723 YDR262WYDR262W 819 nt2.48□□□□□ -2.01
PRP38Q00723 SAE2YGL175C 1038 nt2.48□□□□□ -2.01
PRP38Q00723 THG1YGR024C 714 nt2.48□□□□□ -2.01
PRP38Q00723 AIM19YIL087C 474 nt2.48□□□□□ -2.01
PRP38Q00723 LSM8YJR022W 330 nt2.48□□□□□ -2.01
PRP38Q00723 MRPL33YMR286W 261 nt2.48□□□□□ -2.01
PRP38Q00723 ATX1YNL259C 222 nt2.48□□□□□ -2.01
PRP38Q00723 CUR1YPR158W 759 nt2.48□□□□□ -2.01
PRP38Q00723 SUS1YBR111W-A 291 nt2.48□□□□□ -2.01
PRP38Q00723 BNR1YIL159W 4128 nt2.48□□□□□ -2.01
PRP38Q00723 HOP1YIL072W 1818 nt2.47□□□□□ -2.01
PRP38Q00723 LST4YKL176C 2487 nt2.47□□□□□ -2.01
PRP38Q00723 MSH4YFL003C 2637 nt2.47□□□□□ -2.01
PRP38Q00723 STN1YDR082W 1485 nt2.47□□□□□ -2.01
PRP38Q00723 ISW1YBR245C 3390 nt2.47□□□□□ -2.01
PRP38Q00723 YCR013CYCR013C 648 nt2.47□□□□□ -2.01
PRP38Q00723 RSM18YER050C 417 nt2.47□□□□□ -2.01
PRP38Q00723 YHR050W-AYHR050W-A 171 nt2.47□□□□□ -2.01
PRP38Q00723 AIM18YHR198C 966 nt2.47□□□□□ -2.01
PRP38Q00723 SDS22YKL193C 1017 nt2.47□□□□□ -2.01
PRP38Q00723 MRPL40YPL173W 894 nt2.47□□□□□ -2.01
PRP38Q00723 SWD3YBR175W 948 nt2.47□□□□□ -2.01
PRP38Q00723 YCL007CYCL007C 393 nt2.47□□□□□ -2.01
PRP38Q00723 PTP3YER075C 2787 nt2.47□□□□□ -2.01
PRP38Q00723 YLR001CYLR001C 2589 nt2.47□□□□□ -2.01
PRP38Q00723 SLF1YDR515W 1344 nt2.46□□□□□ -2.02
PRP38Q00723 UBC5YDR059C 447 nt2.46□□□□□ -2.02
PRP38Q00723 YIP1YGR172C 747 nt2.46□□□□□ -2.02
PRP38Q00723 Q0144Q0144 330 nt2.46□□□□□ -2.02
PRP38Q00723 YGR226CYGR226C 210 nt2.46□□□□□ -2.02
PRP38Q00723 DAD2YKR083C 402 nt2.46□□□□□ -2.02
PRP38Q00723 SRL3YKR091W 741 nt2.46□□□□□ -2.02
PRP38Q00723 ADI1YMR009W 540 nt2.46□□□□□ -2.02
PRP38Q00723 PAI3YMR174C 207 nt2.46□□□□□ -2.02
PRP38Q00723 RPL23AYBL087C 414 nt2.46□□□□□ -2.02
PRP38Q00723 YNR025CYNR025C 360 nt2.46□□□□□ -2.02
PRP38Q00723 CSI2YOL007C 1026 nt2.46□□□□□ -2.02
PRP38Q00723 SNA4YDL123W 423 nt2.45□□□□□ -2.02
PRP38Q00723 YER066C-AYER066C-A 501 nt2.45□□□□□ -2.02
PRP38Q00723 RPL11BYGR085C 525 nt2.45□□□□□ -2.02
PRP38Q00723 PCL5YHR071W 690 nt2.45□□□□□ -2.02
PRP38Q00723 ECI1YLR284C 843 nt2.45□□□□□ -2.02
PRP38Q00723 YOR055WYOR055W 435 nt2.45□□□□□ -2.02
PRP38Q00723 YRO2YBR054W 1035 nt2.45□□□□□ -2.02
PRP38Q00723 YPL142CYPL142C 318 nt2.45□□□□□ -2.02
PRP38Q00723 ACM1YPL267W 630 nt2.45□□□□□ -2.02
PRP38Q00723 RPL11AYPR102C 525 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 56.9 ms