Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.63□□□□□ -0.07
RPL39P62891 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RPL39P62891 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RPL39P62891 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.63□□□□□ -0.07
RPL39P62891 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RPL39P62891 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.63□□□□□ -0.07
RPL39P62891 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.63□□□□□ -0.07
RPL39P62891 MIR6724-1-201ENST00000616420 92 ntBASIC14.63□□□□□ -0.07
RPL39P62891 MIR6724-2-201ENST00000616483 92 ntBASIC14.63□□□□□ -0.07
RPL39P62891 MIR6724-4-201ENST00000617390 92 ntBASIC14.63□□□□□ -0.07
RPL39P62891 MIR6724-3-201ENST00000622482 92 ntBASIC14.63□□□□□ -0.07
RPL39P62891 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RPL39P62891 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.63□□□□□ -0.07
RPL39P62891 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL39P62891 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL39P62891 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL39P62891 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.62□□□□□ -0.07
RPL39P62891 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL39P62891 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL39P62891 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.62□□□□□ -0.07
RPL39P62891 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.62□□□□□ -0.07
RPL39P62891 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPL39P62891 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.62□□□□□ -0.07
RPL39P62891 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL39P62891 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPL39P62891 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPL39P62891 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RPL39P62891 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL39P62891 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL39P62891 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RPL39P62891 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.61□□□□□ -0.07
RPL39P62891 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL39P62891 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.61□□□□□ -0.07
RPL39P62891 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RPL39P62891 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.61□□□□□ -0.07
RPL39P62891 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RPL39P62891 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.61□□□□□ -0.07
RPL39P62891 FP700111.2-201ENST00000619190 1892 ntBASIC14.61□□□□□ -0.07
RPL39P62891 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL39P62891 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.61□□□□□ -0.07
RPL39P62891 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.61□□□□□ -0.07
RPL39P62891 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.61□□□□□ -0.07
RPL39P62891 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.61□□□□□ -0.07
RPL39P62891 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.61□□□□□ -0.07
RPL39P62891 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL39P62891 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL39P62891 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
RPL39P62891 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL39P62891 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RPL39P62891 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.61□□□□□ -0.07
RPL39P62891 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RPL39P62891 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL39P62891 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPL39P62891 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RPL39P62891 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RPL39P62891 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.6□□□□□ -0.07
RPL39P62891 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.6□□□□□ -0.07
RPL39P62891 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RPL39P62891 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.6□□□□□ -0.07
RPL39P62891 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RPL39P62891 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RPL39P62891 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RPL39P62891 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RPL39P62891 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.6□□□□□ -0.07
RPL39P62891 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPL39P62891 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms