Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB38P57729 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RAB38P57729 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB38P57729 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB38P57729 AC026185.1-201ENST00000445748 174 ntBASIC19.52■□□□□ 0.72
RAB38P57729 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB38P57729 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB38P57729 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB38P57729 AL162412.1-201ENST00000567129 965 ntBASIC19.52■□□□□ 0.72
RAB38P57729 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.52■□□□□ 0.72
RAB38P57729 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB38P57729 RAP2CP1-201ENST00000605103 478 ntBASIC19.52■□□□□ 0.72
RAB38P57729 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
RAB38P57729 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB38P57729 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RAB38P57729 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB38P57729 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB38P57729 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB38P57729 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB38P57729 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RAB38P57729 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB38P57729 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.52■□□□□ 0.71
RAB38P57729 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB38P57729 AC116050.2-201ENST00000612102 1779 ntBASIC19.52■□□□□ 0.71
RAB38P57729 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB38P57729 AC068338.2-201ENST00000563278 1430 ntBASIC19.51■□□□□ 0.71
RAB38P57729 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB38P57729 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB38P57729 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB38P57729 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB38P57729 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB38P57729 AC007322.3-201ENST00000426526 701 ntBASIC19.51■□□□□ 0.71
RAB38P57729 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB38P57729 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB38P57729 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB38P57729 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB38P57729 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB38P57729 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB38P57729 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB38P57729 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB38P57729 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB38P57729 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB38P57729 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB38P57729 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB38P57729 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB38P57729 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RAB38P57729 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB38P57729 AC005229.4-201ENST00000610085 2198 ntBASIC19.5■□□□□ 0.71
RAB38P57729 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB38P57729 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB38P57729 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB38P57729 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RAB38P57729 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB38P57729 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RAB38P57729 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB38P57729 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB38P57729 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.49■□□□□ 0.71
RAB38P57729 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.49■□□□□ 0.71
RAB38P57729 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.49■□□□□ 0.71
RAB38P57729 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB38P57729 CYP2T1P-201ENST00000432607 1285 ntBASIC19.49■□□□□ 0.71
RAB38P57729 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB38P57729 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB38P57729 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 AC005181.1-201ENST00000604782 1256 ntBASIC19.49■□□□□ 0.71
RAB38P57729 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB38P57729 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RAB38P57729 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RAB38P57729 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RAB38P57729 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB38P57729 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.48■□□□□ 0.71
RAB38P57729 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB38P57729 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB38P57729 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RAB38P57729 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB38P57729 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB38P57729 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB38P57729 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB38P57729 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB38P57729 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB38P57729 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB38P57729 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB38P57729 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RAB38P57729 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.48■□□□□ 0.71
RAB38P57729 FAM21FP-204ENST00000608637 956 ntBASIC19.48■□□□□ 0.71
RAB38P57729 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RAB38P57729 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB38P57729 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms