Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HMGCS2P54868 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.09■■□□□ 1.45
HMGCS2P54868 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HMGCS2P54868 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.09■■□□□ 1.45
HMGCS2P54868 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HMGCS2P54868 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC24.08■■□□□ 1.45
HMGCS2P54868 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.08■■□□□ 1.45
HMGCS2P54868 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HMGCS2P54868 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
HMGCS2P54868 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HMGCS2P54868 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
HMGCS2P54868 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HMGCS2P54868 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HMGCS2P54868 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HMGCS2P54868 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HMGCS2P54868 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.08■■□□□ 1.45
HMGCS2P54868 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.08■■□□□ 1.45
HMGCS2P54868 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.08■■□□□ 1.45
HMGCS2P54868 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.08■■□□□ 1.45
HMGCS2P54868 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.08■■□□□ 1.45
HMGCS2P54868 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC24.08■■□□□ 1.45
HMGCS2P54868 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.08■■□□□ 1.45
HMGCS2P54868 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.08■■□□□ 1.44
HMGCS2P54868 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
HMGCS2P54868 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.07■■□□□ 1.44
HMGCS2P54868 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HMGCS2P54868 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
HMGCS2P54868 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC24.07■■□□□ 1.44
HMGCS2P54868 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC24.07■■□□□ 1.44
HMGCS2P54868 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.07■■□□□ 1.44
HMGCS2P54868 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
HMGCS2P54868 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HMGCS2P54868 AC105020.6-201ENST00000621523 1217 ntBASIC24.07■■□□□ 1.44
HMGCS2P54868 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HMGCS2P54868 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HMGCS2P54868 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HMGCS2P54868 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
HMGCS2P54868 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HMGCS2P54868 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HMGCS2P54868 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.06■■□□□ 1.44
HMGCS2P54868 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.06■■□□□ 1.44
HMGCS2P54868 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HMGCS2P54868 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HMGCS2P54868 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HMGCS2P54868 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.06■■□□□ 1.44
HMGCS2P54868 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.06■■□□□ 1.44
HMGCS2P54868 RN7SL471P-201ENST00000580476 299 ntBASIC24.06■■□□□ 1.44
HMGCS2P54868 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC24.06■■□□□ 1.44
HMGCS2P54868 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
HMGCS2P54868 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.06■■□□□ 1.44
HMGCS2P54868 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.06■■□□□ 1.44
HMGCS2P54868 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.06■■□□□ 1.44
HMGCS2P54868 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HMGCS2P54868 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HMGCS2P54868 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
HMGCS2P54868 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
HMGCS2P54868 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
HMGCS2P54868 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.05■■□□□ 1.44
HMGCS2P54868 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
HMGCS2P54868 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC24.05■■□□□ 1.44
HMGCS2P54868 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.05■■□□□ 1.44
HMGCS2P54868 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.05■■□□□ 1.44
HMGCS2P54868 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.05■■□□□ 1.44
HMGCS2P54868 AC069544.1-201ENST00000609399 999 ntBASIC24.05■■□□□ 1.44
HMGCS2P54868 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
HMGCS2P54868 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
HMGCS2P54868 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HMGCS2P54868 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
HMGCS2P54868 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
HMGCS2P54868 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HMGCS2P54868 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
HMGCS2P54868 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HMGCS2P54868 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC24.04■■□□□ 1.44
HMGCS2P54868 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
HMGCS2P54868 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.04■■□□□ 1.44
HMGCS2P54868 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
HMGCS2P54868 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
HMGCS2P54868 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
HMGCS2P54868 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.03■■□□□ 1.44
HMGCS2P54868 AC116050.2-201ENST00000612102 1779 ntBASIC24.03■■□□□ 1.44
HMGCS2P54868 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HMGCS2P54868 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HMGCS2P54868 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
HMGCS2P54868 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.03■■□□□ 1.44
HMGCS2P54868 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.03■■□□□ 1.44
HMGCS2P54868 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
HMGCS2P54868 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.03■■□□□ 1.44
HMGCS2P54868 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC24.03■■□□□ 1.44
HMGCS2P54868 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC24.03■■□□□ 1.44
HMGCS2P54868 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HMGCS2P54868 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.03■■□□□ 1.44
HMGCS2P54868 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
HMGCS2P54868 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
HMGCS2P54868 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
HMGCS2P54868 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HMGCS2P54868 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC24.02■■□□□ 1.44
HMGCS2P54868 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HMGCS2P54868 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.02■■□□□ 1.44
HMGCS2P54868 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.02■■□□□ 1.44
HMGCS2P54868 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms